Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1417
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   6.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -1

Query: 307 GGS*TSLPSIV*KPTSLNL*WLRLPSICLASSEPYGCNPHDISHH 173
           GG   S P      T  +L W    SI   SS+P G   H  ++H
Sbjct: 159 GGDPASSPGAAAGRTGNSLSWNNPCSINSTSSQPVGTQIHQQTNH 203


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 548 FIFECMEESGSEGLDSLLMDKLKPEGFFDSVDYVCI 655
           FIF  +      G D L +D   P+G  D  +YV +
Sbjct: 190 FIFSAIPFLRDRGFDGLDIDWEYPKGSEDKKNYVLL 225


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = -2

Query: 423 VQKVQSPIHQISMQVVH 373
           V+K+++ +HQ++ +V+H
Sbjct: 502 VEKLETLVHQLNTEVLH 518


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 642 TMYVYPDNYWLGTTKPCXLMVYAESA 719
           T Y+Y  N W+G   P  + +  + A
Sbjct: 325 TPYMYKGNQWVGYDNPKSIAIKVQYA 350


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 648 YVYPDNYWLGTTKPCXLMVYAESA 719
           Y+Y D  W+G   P  + + A+ A
Sbjct: 315 YLYDDTLWVGFDNPKSVALKAQYA 338


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 208 PYGCNPHDISH 176
           P G NPHDI++
Sbjct: 749 PVGTNPHDINN 759


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 208 PYGCNPHDISH 176
           P G NPHDI++
Sbjct: 641 PVGTNPHDINN 651


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 51  TSFCKNGNGK 80
           T FC+NGN K
Sbjct: 695 TCFCENGNNK 704


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 247 WLRLPSICLASSEPYGCNP 191
           W+ +  IC+++  P  C+P
Sbjct: 478 WMPVMRICVSAWNPKDCDP 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,373
Number of Sequences: 336
Number of extensions: 4382
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)