Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1417
(742 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 30 0.065
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.80
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 26 1.1
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 25 3.2
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 25 3.2
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 25 3.2
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 4.3
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 7.5
AF203333-1|AAF19828.1| 119|Anopheles gambiae immune-responsive ... 23 9.9
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 30.3 bits (65), Expect = 0.065
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Frame = -1
Query: 529 LSTSALIALMVCSQPSTGP-LSSVEP-----LPYNFSLRSTSSKGSVSHPSDFNAGCTS- 371
LS +V S P+ G L+S P P+ L TSSK + +HPS A S
Sbjct: 694 LSAGGSPVAVVSSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASP 753
Query: 370 K*P*IQTVFFFGSLPNTPTKTGGS---*TSLPSIV*KPTSLNL*WLRLPSICLASSEPYG 200
P + T G NTP T+ P SL+ P L+S P G
Sbjct: 754 SSPIVATSSSGGGGSNTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHPHSALSSHSPVG 813
Query: 199 CNPHDISH 176
H + H
Sbjct: 814 AGSHHLHH 821
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.6 bits (56), Expect = 0.80
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 223 LASSEPYGCNPHDISHH 173
LAS PYG H +SHH
Sbjct: 696 LASGSPYGGGGHHLSHH 712
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 22 YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQL 138
YHQ + + K+ +K EI K ++NKD Y ++
Sbjct: 891 YHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRI 929
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.6 bits (51), Expect = 3.2
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 677 SQPIVIGIYIHSLHYQRI--PQVSICPLISCQALRNQIPPYIRK*TSN*QAAQHQCPYSI 504
S PI+IG+ + H + I P V+IC + LR + I + T Q C SI
Sbjct: 88 SSPIIIGLNPIATHIRNIPFPAVTIC---NMNQLRREAAERIEQNTLEQTVLQSIC--SI 142
Query: 503 DG-MQPTKY 480
DG T+Y
Sbjct: 143 DGDFNDTQY 151
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 24.6 bits (51), Expect = 3.2
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 677 SQPIVIGIYIHSLHYQRI--PQVSICPLISCQALRNQIPPYIRK*TSN*QAAQHQCPYSI 504
S PI+IG+ + H + I P V+IC + LR + I + T Q C SI
Sbjct: 88 SSPIIIGLNPIATHIRNIPFPAVTIC---NMNQLRREAAERIEQNTLEQTVLQSIC--SI 142
Query: 503 DG-MQPTKY 480
DG T+Y
Sbjct: 143 DGDFNDTQY 151
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 124 SYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATT 252
S+ ++ V + S + A+ R + W+Q +K+VG T
Sbjct: 814 SWSARKQQCVTLSSTEAEYVALAEACRELLWLQKLMKDVGEKT 856
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 24.2 bits (50), Expect = 4.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 544 QIDRQLSTSALIALMVCSQPSTGPLSSVEPLP 449
Q DR + S L A + QPS P PLP
Sbjct: 178 QRDRDVLNSLLAAKVGGGQPSASPRQPPTPLP 209
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.4 bits (48), Expect = 7.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 544 QIDRQLSTSALIALMVCSQPSTGPLSSVEPLP 449
Q DR L S L A + QPS PLP
Sbjct: 154 QRDRNLLNSLLAAKVAGGQPSASSRQPPTPLP 185
>AF203333-1|AAF19828.1| 119|Anopheles gambiae immune-responsive
alpha-macroglobulinand complement C3-related protein
IMCR14 protein.
Length = 119
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 160 PSVSCDVKYRADCIRMVHWMQDKLKEVGATT 252
PS S V +R + + W DK++ G+TT
Sbjct: 40 PSNS-QVSFRTNSLESWLWKTDKIRSSGSTT 69
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,631
Number of Sequences: 2352
Number of extensions: 17283
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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