Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1417
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein si... 37 0.016
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino... 32 0.46
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 31 1.1
At1g62570.1 68414.m07059 flavin-containing monooxygenase family ... 30 1.9
At1g44180.1 68414.m05103 aminoacylase, putative / N-acyl-L-amino... 29 3.2
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 28 7.5
At5g25430.1 68418.m03019 anion exchange protein family contains ... 27 9.9
At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase, puta... 27 9.9
At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A... 27 9.9
At2g17530.1 68415.m02028 protein kinase family protein identical... 27 9.9
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 27 9.9
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 27 9.9
>At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein
similar to acetylornithine deacetylase
(Acetylornithinase, AO; N-acetylornithinase, NAO)
[Dictyostelium discoideum] SWISS-PROT:P54638
Length = 440
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 366 HLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPV 482
H+DV A D WE +PF L +KL GRG+TD G V
Sbjct: 101 HMDVVTA-NPDDWEFDPFSLSIDGDKLRGRGTTDCLGHV 138
>At1g44820.1 68414.m05134 aminoacylase, putative /
N-acyl-L-amino-acid amidohydrolase, putative similar to
aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
ACY-1)[Homo sapiens] SWISS-PROT:Q03154
Length = 438
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 330 NDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE-KLYGRGSTDDKGPVLGWLHTIN 506
++P ++ HLD PA +S+ W PF + + +Y RG+ DDK + +L +I
Sbjct: 85 SNPNLPSILFNSHLDSVPA-ESEKWTYPPFSAHKTIDGHIYARGAQDDKCIGVQYLESIR 143
Query: 507 AIRA 518
+++
Sbjct: 144 NLKS 147
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291)
[Arabidopsis thaliana]
Length = 2603
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 485 WLAAYHQCYKGTGAELPVNLKFIFECMEESGS--EGLD-SLLMDKLKPEGFFDSVD 643
WL ++Q K EL V LKF+ + + ++G +G + S ++D+ K FFD V+
Sbjct: 983 WLDEHYQLVKKEACELAVRLKFLEDLIHKAGQSPKGAETSAVLDERKM--FFDGVE 1036
>At1g62570.1 68414.m07059 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
flavin-containing monooxygenase FMO3 [Rattus norvegicus]
GI:12006730; contains Pfam profile PF00743:
Flavin-binding monooxygenase-like
Length = 461
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 34 YSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVH 213
+ V SK V+A ++ TLP + + +D K SY+ +EA+ IP ++ C +
Sbjct: 337 FEVQSKWVAAVLSGRVTLPSVDEMMDDLKLSYE--TQEALGIPKRYTHKLGKSQC-EYLD 393
Query: 214 WMQD 225
W+ D
Sbjct: 394 WIAD 397
>At1g44180.1 68414.m05103 aminoacylase, putative /
N-acyl-L-amino-acid amidohydrolase, putative similar to
aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase,
ACY-1) [Homo sapiens] SWISS-PROT:Q03154
Length = 435
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 345 NTVCIYGHLDVQPALKSDGWETEPFELVERNE-KLYGRGSTDDKGPVLGWLHTINAIRAL 521
+++ HLD PA +S+ W PF + +Y RG+ DDK + +L I +++
Sbjct: 92 SSILFNSHLDSVPA-ESEKWIHPPFSAHRTIDGHIYARGAQDDKCIGVQYLEAIRNLKSR 150
Query: 522 VLSCL 536
S L
Sbjct: 151 SFSPL 155
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 574 RFLHTFENELQIDRQLS 524
RF HT +N+LQ+DR +S
Sbjct: 471 RFYHTTDNQLQLDRDIS 487
>At5g25430.1 68418.m03019 anion exchange protein family contains
similarity to SWISS-PROT:P02730 anion transport protein
(Anion exchange protein 1) [Human]{Homo sapiens}
Length = 641
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 315 LKLAAVERLCHLLFESQHPLICSGSDFLQFVLHPVNHT 202
L ++ E L LF+ QH + SD+ + V P+ H+
Sbjct: 544 LLISIREHLLPKLFDMQHLQVLDASDYEEIVAAPIQHS 581
>At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase,
putative / long-chain acyl-CoA synthetase, putative
similar to acyl-CoA synthetase (MF7P) gi:1617270 from
Brassica napus
Length = 666
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 34 YSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVH 213
+ +S +VS EK +PE+FK N Y +K V+ V + K A+ + +V
Sbjct: 145 FIISHAEVSIAFVEEKKIPELFK-TCPNSTKY---MKTVVSFGGVKPEQKEEAEKLGLVI 200
Query: 214 WMQDKLKEVG 243
D+ ++G
Sbjct: 201 HSWDEFLKLG 210
>At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A26)
identical to Cytochrome P450 71A26 (SP:Q9STK7)
{Arabidopsis thaliana}
Length = 489
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 399 GWETEPFELVERNEKLYGRGSTDDKGPVLGWLHTINAI 512
G ET+ EL+ER KL G S P L W+ I +
Sbjct: 190 GGETDFKELMERLNKLLGTFSVGSYVPWLAWIDWIRGL 227
>At2g17530.1 68415.m02028 protein kinase family protein identical to
SRPK2 [Arabidopsis thaliana] gi|9843645|emb|CAC03676;
contains protein kinase domain, Pfam:PF00069
Length = 440
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 260 GCWLSNNRWQRRSTAASFSRRIG**SKKKYSLYLWSFGCT 379
GCW N + T + + S YS+ +WSF CT
Sbjct: 263 GCWADNKFAEEIQTRQYRAPEVILQSGYSYSVDMWSFACT 302
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1
Query: 574 RFLHTFENELQIDRQLS 524
RF H FEN+LQ+D++++
Sbjct: 429 RFYHIFENQLQMDQEIN 445
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1
Query: 574 RFLHTFENELQIDRQLS 524
RF H FEN+LQ+D++++
Sbjct: 429 RFYHIFENQLQMDQEIN 445
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,933,320
Number of Sequences: 28952
Number of extensions: 356911
Number of successful extensions: 831
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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