Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1416
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 185 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 1e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 1e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 183 1e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 183 1e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 183 1e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 3e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 6e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 6e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 1e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 156 1e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 3e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 107 7e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 5e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 9e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 66 1e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.097
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 31 0.90
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.2
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 30 1.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.6
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.6
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 2.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.6
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 28 4.8
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 28 4.8
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.8
At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family... 28 4.8
At3g28790.1 68416.m03593 expressed protein 28 4.8
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 28 6.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (450), Expect = 3e-47
Identities = 94/133 (70%), Positives = 98/133 (73%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY S P + P
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 614 T*PGXDLTDYLME 652
G DLTDYLM+
Sbjct: 181 DLAGRDLTDYLMK 193
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLY 145
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/45 (86%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA-RSRPDRL 642
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA R D L
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLY 145
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/45 (86%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA-RSRPDRL 642
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA R D L
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 91/133 (68%), Positives = 98/133 (73%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY S P + P
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180
Query: 614 T*PGXDLTDYLME 652
G DLTDYLM+
Sbjct: 181 DLAGRDLTDYLMK 193
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 183 bits (445), Expect = 1e-46
Identities = 91/133 (68%), Positives = 98/133 (73%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY S P + P
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180
Query: 614 T*PGXDLTDYLME 652
G DLTDYLM+
Sbjct: 181 DLAGRDLTDYLMK 193
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 91/133 (68%), Positives = 98/133 (73%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY S P + P
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180
Query: 614 T*PGXDLTDYLME 652
G DLTDYLM+
Sbjct: 181 DLAGRDLTDYLMK 193
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLY 145
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLY 145
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLY 145
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (395), Expect = 1e-40
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREK
Sbjct: 62 QARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREK 121
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFE+F P+MY+ IQAVLSLY
Sbjct: 122 MTQIMFESFAFPSMYIGIQAVLSLY 146
Score = 102 bits (244), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA+A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 148 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 184
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 156 bits (378), Expect = 1e-38
Identities = 87/150 (58%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +2
Query: 206 RDGRYGTEGLLCRR*GKSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 385
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 386 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRP-VVPPVSCWTPATVSST 562
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 563 PCPSTKDTHSPTPSCVWT*PGXDLTDYLME 652
P + P G DLTDYL+E
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLTDYLIE 182
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDL 618
SGRTTG+VLD G+ V HTVP+YEGYALPH ILRLDL
Sbjct: 136 SGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDL 171
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 260
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (375), Expect = 3e-38
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REK
Sbjct: 16 EARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREK 75
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETF P+MY+ +QA LSL+
Sbjct: 76 MTQIMFETFAVPSMYIGMQAALSLH 100
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
SGRTTG VLDSGDGV + VPIYEG ALPHAILRLDLA
Sbjct: 102 SGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLA 138
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 107 bits (257), Expect = 7e-24
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +2
Query: 272 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 451
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 452 ETFNTPAMYVAIQAVLSLY 508
E +N +++ IQAVL+LY
Sbjct: 126 EKYNFAGVFIQIQAVLTLY 144
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 514 GRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
G TG+V+DSGDGV H VP+ +GY+ PH R+++A
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVA 182
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 248
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.7 bits (225), Expect = 5e-20
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +2
Query: 278 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 458 FNTPAMYVAIQAVLSL 505
FN P +Y+A+ +VL+L
Sbjct: 146 FNVPGLYIAVNSVLAL 161
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 523 TGIVLDSGDGVFHTVPIYEGYALPHAILRLDLA 621
TG+V+D GDG H VP+ EGY + I + +A
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIA 205
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 99 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 185
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +2
Query: 260 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 439
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 440 QIMFETFNTPAMYVAIQAVLSLY 508
++MFE + PA+++A VL+ +
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSF 167
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 188
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVFHTVPIYEGYALPHAIL 606
+GR T +V+D G G P+++GY L A++
Sbjct: 169 TGRATSLVVDCGGGSTTISPVHDGYVLQKAVV 200
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 66.5 bits (155), Expect = 1e-11
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 463
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 464 TPAMYVAIQAVLSLY 508
Y + QAVLSLY
Sbjct: 117 VSGFYASEQAVLSLY 131
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 99 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 191
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 260 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 188
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 278 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 458 FNTPAMYVA-IQAVLSLYRPVVPPVS 532
F ++Y+A Q+++ LY P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 445 HVRNIQHARHVRRHPSRALAVPSGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDL 618
H +++ H R P L S +V+D G H VP+ + L HAI R+DL
Sbjct: 130 HPQSLVHLYEASRQPDSIL---SKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDL 184
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 194
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 463
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 464 TPAMYVAIQAVLS 502
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 248
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.097
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 223 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 86
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 30.7 bits (66), Expect = 0.90
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 518 VPPVSCWTPATVSSTPCPSTKDTHSPTPS 604
+PPV+ TP+ ++S P P + T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 515 VVPPVSCWTPATVSSTPCPSTKDT-HSPTPSC 607
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 498 SRCTVRSYHRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 614
S T +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 521 PPVSCWTPATVSSTPCPSTKDTHSPTP 601
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 512 PVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 604
P PP +C +P + STP + +H PTPS
Sbjct: 100 PHTPPCNCGSPPSHPSTPSHPSTPSH-PTPS 129
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 521 PPVSCWTPATVSSTPCPSTKDTHSPTP 601
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 512 PVVPPVSCWTPATVSSTPCPSTKDTHSPTPS 604
P PP +C +P + STP + +H PTPS
Sbjct: 100 PHTPPCNCGSPPSHPSTPSHPSTPSH-PTPS 129
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = +2
Query: 383 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSST 562
P L+T+ P++PK Q +T A Q L+ P PP P +T
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPPPPPPPPPPSPTT 250
Query: 563 PCPSTKDTHSPTPS 604
D P+P+
Sbjct: 251 AAKRNADPAQPSPT 264
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 272 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 272 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 472
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 473 MYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 598
I +L +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 472
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 473 MYVAIQAVLSLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPT 598
I +L +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 400 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 501
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 503
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 500 SLYRPVVPPVSCWTPATVSSTPCPSTKDTHSPTPSCV 610
S Y P VPP + T+S+T + + P PS V
Sbjct: 320 SNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFV 356
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 521 PPVSCWTPATVS-STPCPSTKDTHSPTPS 604
P S TP+T + STP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 512 PVVPPVSCWTPATVS-STPCPSTKDTHSPTPS 604
P P S TP+T + STP PST +P PS
Sbjct: 283 PSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPS 314
>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1230
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 496 ALAVPSGRTTGIVLDSGDGVFHTVPIYEGYALPHA 600
+L +PSG TT +V +SG G + + E + P++
Sbjct: 375 SLLIPSGTTTALVGESGSGKSTVISLIERFYDPNS 409
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 199 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 77
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,314,609
Number of Sequences: 28952
Number of extensions: 392360
Number of successful extensions: 1289
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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