Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1414
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99710-9|CAN99658.1|  402|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z99710-8|CAB16868.1|  383|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    27   8.3  
EF015633-1|ABK20307.1|  383|Caenorhabditis elegans alpha 1,2-fuc...    27   8.3  
AL117207-6|CAB60396.2|  372|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z99710-9|CAN99658.1|  402|Caenorhabditis elegans Hypothetical
           protein F08A8.5b protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 448 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 332
           P G  G ++ + + +H +      +AV+N T PSF + L
Sbjct: 91  PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 129


>Z99710-8|CAB16868.1|  383|Caenorhabditis elegans Hypothetical
           protein F08A8.5a protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 448 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 332
           P G  G ++ + + +H +      +AV+N T PSF + L
Sbjct: 72  PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 369 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLCGKKTT 497
           T +P  TT    T T++PT+   APT  T++   T      TT
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -1

Query: 204 EDPIASPLVHVRLGASCAWRF**DSPSFCN 115
           E PI S  V  R G SC +     SP FCN
Sbjct: 647 ECPIGSVEVDPRFGTSCRYSLQCPSPYFCN 676


>EF015633-1|ABK20307.1|  383|Caenorhabditis elegans alpha
           1,2-fucosyltransferase protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 448 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 332
           P G  G ++ + + +H +      +AV+N T PSF + L
Sbjct: 72  PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110


>AL117207-6|CAB60396.2|  372|Caenorhabditis elegans Hypothetical
           protein Y60A3A.8 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 48  PINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLVE 173
           PI+ P ++  P + ++ V +   YKN  CL K +K  + LV+
Sbjct: 2   PISEPTWAELPFLFKSAVVELLPYKNRCCLRKCSKSDQFLVD 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,672,625
Number of Sequences: 27780
Number of extensions: 305154
Number of successful extensions: 941
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)