Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1414
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    26   0.26 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               25   0.80 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +3

Query: 318 TGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLCG 485
           TG    F   + P+L    S         TC  SP++     TG +S   ++++CG
Sbjct: 301 TGCLYYFSTTINPILYNVMSAKYRNAFKETCRCSPSNPSITRTGLSSVRDSSIICG 356


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 111 KYYKNLGCLIKNAKRKKHLVEHEQ 182
           KY  N  C I  A  K H++++++
Sbjct: 70  KYLTNYSCFITCALEKSHIIQNDE 93


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 39  IKKPINMPNYSYTPTIGR 92
           +++P   PNYS   TIG+
Sbjct: 509 VRQPGKAPNYSVNWTIGQ 526


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,119
Number of Sequences: 438
Number of extensions: 3757
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)