Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1413
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.4  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 351 PACRTPTRPTACAVDETPRSAVPTAPASC 437
           P C+  +   +C V+  P  A+   P  C
Sbjct: 132 PDCKDESDENSCTVETDPNRALDCDPTQC 160


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 502 GAVGVLTPSLLALAAARAIEVFVFVTFLMGMRDGVVAS 615
           G    LTP  + L     I+ F  V F + +  GVV S
Sbjct: 13  GKFFALTPRSIKLEKQTFIQKFYAVAFFLALSIGVVVS 50


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 351 PACRTPTRPTACAVDETPRSAVPTAPASC 437
           P C+  +   +C V+  P  A    P  C
Sbjct: 139 PDCKDESDENSCTVETDPNRAPDCDPTQC 167


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 112 HRHSNKCRL*YICIK 68
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 112 HRHSNKCRL*YICIK 68
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 340 RPPRPRHAQNHRETRTIPIVNERKQTTH 257
           R P PR  ++H    T   +N+R +  H
Sbjct: 42  RQPYPRQKKSHPPQWTWQCINQRCERRH 69


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 75  NGAPPRSTPPLSTPSNSNATKSSGLTSPL 103


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 510 DGSRPRTPTGYLTPASGRQRTPSGSTTPV 424
           +G+ PR+     TP++      SG T+P+
Sbjct: 119 NGAPPRSTPPLSTPSNSNATKSSGLTSPL 147


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 620 YYPRIKFDPCLEGG 661
           YYP  K D C  GG
Sbjct: 66  YYPIYKLDVCGNGG 79


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -1

Query: 501 RPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 409
           R   P G  T   G+ R  + + TP  +  +
Sbjct: 302 RKTNPAGVTTTTKGKVRAKTQNATPANNNDK 332


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 620 YYPRIKFDPCLEGG 661
           YYP  K D C  GG
Sbjct: 66  YYPIYKLDVCGTGG 79


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -1

Query: 501 RPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 409
           R   P G  T   G+ R  + + TP  +  +
Sbjct: 302 RKTNPAGVTTTTKGKVRAKTQNATPANNNDK 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,643
Number of Sequences: 336
Number of extensions: 2870
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)