Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1410
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 3e-39
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_56| Best HMM Match : Actin (HMM E-Value=0) 158 4e-39
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 157 5e-39
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 138 4e-33
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 52 5e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 3e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_54| Best HMM Match : Actin (HMM E-Value=0) 39 0.004
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 31 0.80
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37) 28 5.7
SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05) 28 7.5
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 27 9.9
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 158 bits (384), Expect = 3e-39
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = -3
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 275 GGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 334
Query: 328 EYDESGPSIVHRKCF 284
EYDESGP+IVHRKCF
Sbjct: 335 EYDESGPAIVHRKCF 349
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
+ IHETTYNSIMKCDVDIRKDLYANTV+S
Sbjct: 246 SGIHETTYNSIMKCDVDIRKDLYANTVMS 274
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 158 bits (383), Expect = 4e-39
Identities = 82/120 (68%), Positives = 89/120 (74%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*GLVRQHRIVGGTTMYPGIADRMQK 464
CPEA+FQ P F ++ G + L + GGTTMYPGIADRMQK
Sbjct: 220 CPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 278
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
EI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 279 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
A IHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 235 AGIHETTYNSIMKCDVDIRKDLYANTVLS 263
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 158 bits (383), Expect = 4e-39
Identities = 82/120 (68%), Positives = 89/120 (74%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*GLVRQHRIVGGTTMYPGIADRMQK 464
CPEA+FQ P F ++ G + L + GG+TMYPGIADRMQK
Sbjct: 258 CPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 316
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
EIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 317 EITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
A IHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 273 AGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 158 bits (383), Expect = 4e-39
Identities = 82/120 (68%), Positives = 89/120 (74%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*GLVRQHRIVGGTTMYPGIADRMQK 464
CPEA+FQ P F ++ G + L + GG+TMYPGIADRMQK
Sbjct: 257 CPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 315
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
EIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 316 EITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
A IHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 272 AGIHETTYNSIMKCDVDIRKDLYANTVLS 300
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 157 bits (382), Expect = 5e-39
Identities = 82/120 (68%), Positives = 89/120 (74%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*GLVRQHRIVGGTTMYPGIADRMQK 464
CPEA+FQ P F ++ G + L + GG+TMYPGIADRMQK
Sbjct: 258 CPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQK 316
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
EI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 317 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
A IHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 273 AGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 156 bits (378), Expect = 2e-38
Identities = 81/120 (67%), Positives = 89/120 (74%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*GLVRQHRIVGGTTMYPGIADRMQK 464
CPEA+FQ P F ++ G + L + GG+TM+PGIADRMQK
Sbjct: 257 CPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQK 315
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
EI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 316 EISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -1
Query: 594 AAIHETTYNSIMKCDVDIRKDLYANTVLS 508
A IHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 272 AGIHETTYNSIMKCDVDIRKDLYANTVLS 300
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 138 bits (334), Expect = 4e-33
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Frame = -3
Query: 643 CPEALFQTPRFWVWKACGNPRDHI*LHHEVRRGHP*---GLVRQHRIVGGTTMYPGIADR 473
CPEA+FQ P F +A P H +++ + + L + GG+TM+PGIADR
Sbjct: 31 CPEAMFQ-PAFLGMEA---PGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADR 86
Query: 472 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 293
MQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHR
Sbjct: 87 MQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHR 146
Query: 292 KCF 284
KCF
Sbjct: 147 KCF 149
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -1
Query: 588 IHETTYNSIMKCDVDIRKDLYANTVLS 508
IHE YN IMKCDVDIRKDLY+N VLS
Sbjct: 48 IHEAIYNCIMKCDVDIRKDLYSNCVLS 74
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = -3
Query: 535 GLVRQHRIVGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 365
GL + GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 364 L 362
L
Sbjct: 230 L 230
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = -3
Query: 451 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 272
+ P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 588 IHETTYNSIMKCDVDIRKDLYANTVLS 508
+ E N I C +D+R+ LY N VLS
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLS 249
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -3
Query: 433 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 311
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -1
Query: 588 IHETTYNSIMKCDVDIRKDLYANTVLS 508
IHE+ + SI KCD+D+R +L+ N VLS
Sbjct: 2319 IHESIFKSIKKCDIDLRAELFHNIVLS 2345
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Frame = -3
Query: 514 IVGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGGSILASL 362
++GGT M PG R+ +EI L S +K+ PP + W+GG+I SL
Sbjct: 83 LIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGGAIFGSL 142
Query: 361 STFQQMWISKQEYDE 317
+++ Y +
Sbjct: 143 EVLADRSTTRERYQQ 157
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 357 PSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQRPRPAAQ 235
P N+ G++ R +L P++TGS + R RP P+A+
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSAR 919
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 390 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRCLQR 253
GS+ SP S P +R GSR R+ T+S A + +T ++C R
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKCTTR 387
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 330 RSTTSLAPPLYTGSASKRTARRCLQRPRPAAQFRL 226
++T P++T S K+T R C++ P P + R+
Sbjct: 18 KNTLRFIMPVFTRSGRKKTNRTCIEDPTPQTERRV 52
>SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)
Length = 1376
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 580 LVDCRKLSIPKNEGFGRE 633
+VDC KL+ P N G GRE
Sbjct: 1125 IVDCNKLTRPSNRGNGRE 1142
>SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05)
Length = 1130
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 612 FGYGKLAAIHETTYNSIMKCDVDIRKDLYANTVLSV 505
FG+G L T + S++ DV R+D N + SV
Sbjct: 839 FGFGVLGLTVHTFFYSVLLLDVIFREDTLLNVIRSV 874
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 591 AIHETTYNSIMKCDVDIRKDLYANTVLS 508
+I E +I K D+D+R+ LY+N VLS
Sbjct: 256 SIIEVLAFAIQKSDLDLRRVLYSNIVLS 283
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 402 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSAS 283
STP +V PP PSN + ++ S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,204,001
Number of Sequences: 59808
Number of extensions: 474648
Number of successful extensions: 1333
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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