Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1408
         (468 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    25   1.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   5.3  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   5.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   9.3  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    22   9.3  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +2

Query: 137 VFXFTSESVGEGHPDKMCDQISDAFLDAHLNQD 235
           VF       G G PD    QI  A L+  +N D
Sbjct: 2   VFGSKVIKAGNGEPDAFETQIGQAILELEMNSD 34


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 166  RGSSRQNVRPNKRRFSRRAPESGSGRK 246
            RGS R   R   R  SR    SGSG +
Sbjct: 1158 RGSRRSRSRSRSRSGSRSRSRSGSGSR 1184


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 155  ESVGEGHPDKMCDQISDAFLDAHLNQDPDA 244
            E +GEG PD +C       L  HL +D D+
Sbjct: 1030 ELLGEGGPDPVCPDT----LQRHLLRDADS 1055


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 365 MXPSKGLDYKTCSVMLALXQQSPNIAAGVHDNR 463
           + P+K      C + +AL      +   VHD+R
Sbjct: 53  LVPAKDFPSAVCEMCIALLHDFDTLYQNVHDHR 85


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 6   GGSFRGTXWGYXSGL 50
           GG+  G  WG+ +GL
Sbjct: 450 GGTIIGVIWGFLTGL 464


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 250 RIETITKTGMVLLCGEITXKAXVDYQKVVRETVKHIG 360
           RI      G++   G+      VDY KVV+ ++ + G
Sbjct: 291 RIRGTKNGGLLFELGKSDDDCGVDYAKVVQNSIGNNG 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,624
Number of Sequences: 2352
Number of extensions: 10373
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)