Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1407
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 137 2e-32
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 137 2e-32
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 137 2e-32
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 137 2e-32
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 137 2e-32
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 128 1e-29
AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein. 31 2.3
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 30 5.4
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 30 5.4
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 30 5.4
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 30 5.4
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 30 5.4
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 30 5.4
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 30 5.4
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 30 5.4
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 30 5.4
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 30 5.4
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (332), Expect = 2e-32
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD+VEG+TGNLFEVYLKPYF+EAYRP
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRP 145
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 83 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANA 262
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLK
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 263 ARK 271
R+
Sbjct: 64 RRE 66
Score = 44.4 bits (100), Expect = 3e-04
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVET PSP+C
Sbjct: 152 FLVRGGMRAVEFKVVETHPSPYC 174
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (332), Expect = 2e-32
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD+VEG+TGNLFEVYLKPYF+EAYRP
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRP 145
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 83 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANA 262
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLK
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 263 ARK 271
R+
Sbjct: 64 RRE 66
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVETDPSP+C
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYC 174
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (332), Expect = 2e-32
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD+VEG+TGNLFEVYLKPYF+EAYRP
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRP 145
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 83 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANA 262
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLK
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 263 ARK 271
R+
Sbjct: 64 RRE 66
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVETDPSP+C
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYC 174
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 137 bits (332), Expect = 2e-32
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD+VEG+TGNLFEVYLKPYF+EAYRP
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRP 145
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 83 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANA 262
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLK
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 263 ARK 271
R+
Sbjct: 64 RRE 66
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVETDPSP+C
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYC 174
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 137 bits (332), Expect = 2e-32
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
L +GK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD+VEG+TGNLFEVYLKPYF+EAYRP
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRP 145
Score = 91.1 bits (216), Expect = 3e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 83 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANA 262
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLK
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 263 ARK 271
R+
Sbjct: 64 RRE 66
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVETDPSP+C
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYC 174
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 128 bits (310), Expect = 1e-29
Identities = 56/81 (69%), Positives = 63/81 (77%)
Frame = +1
Query: 265 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 444
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 445 GLTGNLFEVYLKPYFMEAYRP 507
G+TGNLFEVYLKPYF+EAYRP
Sbjct: 63 GITGNLFEVYLKPYFLEAYRP 83
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 525 FMVRGGMRAAXFKVVETDPSPFC 593
F+VRGGMRA FKVVETDPSP+C
Sbjct: 90 FLVRGGMRAVEFKVVETDPSPYC 112
>AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein.
Length = 3027
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 388 DTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFPCGVCLEQ 245
+ ERW +K A + FS G F H + L A C R VCLE+
Sbjct: 1673 EDERW---RKAALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEK 1717
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 558 FKVVETDPSPFC 593
FKVVETDPSP+C
Sbjct: 1 FKVVETDPSPYC 12
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 466 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 287
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 286 ARCKRFPCGVCLEQD 242
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,565,766
Number of Sequences: 237096
Number of extensions: 1783889
Number of successful extensions: 3513
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3513
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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