Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1407
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 110 8e-25
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 110 8e-25
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.3
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 5.8
U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical pr... 28 5.8
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 28 5.8
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 28 5.8
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 28 5.8
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 5.8
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 122 bits (294), Expect = 2e-28
Identities = 50/88 (56%), Positives = 69/88 (78%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
+ +GK+RKE+V I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD++EGLTGNLF+V+LKPYF+EAYRP
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRP 151
Score = 77.0 bits (181), Expect = 9e-15
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = +2
Query: 92 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANAARK 271
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LK ++
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 272 PFA 280
A
Sbjct: 73 SVA 75
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 510 HRDXTFMVRGGMRAAXFKVVETDPSPFC 593
H+ F V+ MR FKVVET+P+P C
Sbjct: 153 HKGDIFTVQAAMRTVEFKVVETEPAPAC 180
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 110 bits (264), Expect = 8e-25
Identities = 49/88 (55%), Positives = 67/88 (76%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
+ +GK+R+ETV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD++EGLTGNLF+V+L+PYF +AYRP
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRP 150
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +2
Query: 92 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANAARK 271
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LK R+
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 510 HRDXTFMVRGGMRAAXFKVVETDPSPFC 593
H+ F V+ MR FKVVETDP+P C
Sbjct: 152 HKGDIFTVQAAMRTVEFKVVETDPAPAC 179
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 110 bits (264), Expect = 8e-25
Identities = 49/88 (55%), Positives = 67/88 (76%)
Frame = +1
Query: 244 LAQGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 423
+ +GK+R+ETV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRP 507
PIDD++EGLTGNLF+V+L+PYF +AYRP
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRP 150
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +2
Query: 92 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKANAARK 271
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LK R+
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 510 HRDXTFMVRGGMRAAXFKVVETDPSPFC 593
H+ F V+ MR FKVVETDP+P C
Sbjct: 152 HKGDIFTVQAAMRTVEFKVVETDPAPAC 179
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 106 IIRAFIICHFIQNLLLESKNYYNFY 32
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 71 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 220
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical
protein F28E10.1d protein.
Length = 450
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRPTIVTTP 525
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 85 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 118
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRPTIVTTP 525
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 627 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 660
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRPTIVTTP 525
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 723 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 756
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 424 PIDDSVEGLTGNLFEVYLKPYFMEAYRPTIVTTP 525
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 769 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 802
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 71 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 220
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,046,934
Number of Sequences: 27780
Number of extensions: 284344
Number of successful extensions: 659
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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