Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1406
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical p...    31   0.56 
Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical p...    31   0.56 
AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical ...    31   0.56 
AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical ...    31   0.56 
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass...    30   1.7  
U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical...    28   5.3  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 127 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVL 240
           +E K LR      E E+ + RKE+D +RR++++ SQ +
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTV 606


>Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 127 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVL 240
           +E K LR      E E+ + RKE+D +RR++++ SQ +
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTV 606


>AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 127 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVL 240
           +E K LR      E E+ + RKE+D +RR++++ SQ +
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTV 606


>AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 127 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVL 240
           +E K LR      E E+ + RKE+D +RR++++ SQ +
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTV 606


>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 278 protein.
          Length = 1130

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 64  LKELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQEQEILQLRKELDEVRRE 216
           L+EL +  K + EDLV  +   +   L      +E+E+  L KELD+V+ E
Sbjct: 316 LQELQLQSKRSREDLV--SCKNDVTALEKKLHNKEKEVQTLTKELDQVKTE 364


>U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical
           protein F41H10.4 protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 91  EATEDLVGYTAAEEAKRLRAVNVKQEQEILQLRKELDEVRRE 216
           E  + L+  T+  EA  +  +  K  +E L++RKE++E+RRE
Sbjct: 175 ELEDRLLSITSESEA--ILKIKEKVVEENLRIRKEIEELRRE 214


>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
           protein Y47D3A.26 protein.
          Length = 1205

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +1

Query: 163 QEQEILQLRKELDEVRRELARVSQ 234
           +EQ + +LRK++DE+ ++LA VS+
Sbjct: 797 EEQTVKKLRKKVDEMTKQLATVSR 820


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 645  SLGSSTPTGDR*PALDQWKLEPGGRCAFRMKAACA 541
            SL ++ PT      +D W++E GG   FR    CA
Sbjct: 1153 SLLANPPTVTGQTTMDNWRIEKGGLFNFRTSEFCA 1187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,431,373
Number of Sequences: 27780
Number of extensions: 290985
Number of successful extensions: 966
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)