Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1405
         (375 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    31   0.35 
Z81463-1|CAB03850.1|  342|Caenorhabditis elegans Hypothetical pr...    28   1.9  
U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    27   4.4  
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    27   4.4  
U97593-1|AAB52875.1|  715|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AL132876-8|CAD21660.1|  829|Caenorhabditis elegans Hypothetical ...    26   7.6  

>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 30.7 bits (66), Expect = 0.35
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 142 ITTSSWPPLTTPQNRLTRKPATVNTLTQPYESIRSTNT 255
           ITTS+  P +T Q+  T KP T +T+T P  S   T+T
Sbjct: 155 ITTSTLSPPSTVQSTTTAKPTTTSTIT-PTTSADPTST 191


>Z81463-1|CAB03850.1|  342|Caenorhabditis elegans Hypothetical
           protein C06B8.1 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 33  PFFVRNVDLYNNLGLEPIKKHLESASELYYDKAMPHDN 146
           P+F  N+D++ N+G    +   ES+   +YD  +P  N
Sbjct: 180 PYFAANIDVFKNIG----RDEYESSIIDFYDGVLPETN 213


>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 151 SSWPPLTTPQNRLTRKPATVNTLTQPYESIRSTNTS*DTCNSKTRS 288
           S+ PP T+  +  T+KP+T  T T P  +  ST T+  T    T S
Sbjct: 581 STVPPTTSTSSTTTQKPST--TTTVPSTTPTSTTTTTTTTPKPTTS 624


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 151 SSWPPLTTPQNRLTRKPATVNTLTQPYESIRSTNTS*DTCNSKTRS 288
           S+ PP T+  +  T+KP+T  T T P  +  ST T+  T    T S
Sbjct: 581 STVPPTTSTSSTTTQKPST--TTTVPSTTPTSTTTTTTTTPKPTTS 624


>U97593-1|AAB52875.1|  715|Caenorhabditis elegans Hypothetical
           protein C46G7.3 protein.
          Length = 715

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 157 WPPLTTPQNRLTRKPATVNTLTQPYESIRSTNTS 258
           +P  +TP NRLT  P   N L     S R+ + +
Sbjct: 292 YPASSTPHNRLTFAPTNTNRLQDTTNSPRTNDVT 325


>AL132876-8|CAD21660.1|  829|Caenorhabditis elegans Hypothetical
           protein Y105E8A.9 protein.
          Length = 829

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 212 TP*HSLTNLSDPLTRHKILAILKL 283
           +P H +T +SDP  + KIL +L++
Sbjct: 254 SPEHDVTGISDPFLQVKILRLLRV 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,017,218
Number of Sequences: 27780
Number of extensions: 143503
Number of successful extensions: 455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)