Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1405
         (375 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor...    31   0.19 
At5g19670.1 68418.m02340 exostosin family protein contains Pfam ...    29   0.76 
At4g32790.1 68417.m04665 exostosin family protein contains Pfam ...    27   5.4  
At1g48560.1 68414.m05430 expressed protein                             27   5.4  
At1g14250.1 68414.m01687 nucleoside phosphatase family protein /...    27   5.4  
At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) simi...    27   5.4  
At3g17180.1 68416.m02191 serine carboxypeptidase S10 family prot...    26   9.4  
At1g37045.1 68414.m04623 hypothetical protein                          26   9.4  

>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
           (CPK9) identical to calmodulin-domain protein kinase
           CDPK isoform 9 [Arabidopsis thaliana]
           gi|1399265|gb|AAB03242
          Length = 541

 Score = 31.5 bits (68), Expect = 0.19
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 103 PRRNCTTIRRCHMITTSSWPPLTTPQNRLTR---KPATVNTLTQPYES 237
           P++N  T R   +  T+  PP  TPQ R T+   KP +VN+   P+ +
Sbjct: 14  PQQNGNTTRSVEVGVTNQDPPSYTPQARTTQQPEKPGSVNSQPPPWRA 61


>At5g19670.1 68418.m02340 exostosin family protein contains Pfam
           domain, PF03016: Exostosin family
          Length = 600

 Score = 29.5 bits (63), Expect = 0.76
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   IPYCRLAVGAPFFVRNVDLYNNLGLEPIKKHLESASELY-YDKAMPHDNHFIVAAADYAP 179
           +P+    +    +VRN     NL  + +K++ E  S  Y +       +HF+VA  D+AP
Sbjct: 322 MPFSARMLEYTLYVRNSHNRTNLR-QFLKEYTEHISSKYPFFNRTDGADHFLVACHDWAP 380

Query: 180 ESTHAEASYC 209
             T     +C
Sbjct: 381 YETRHHMEHC 390


>At4g32790.1 68417.m04665 exostosin family protein contains Pfam
           domain, PF03016: Exostosin family
          Length = 593

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 84  IKKHLESASELY--YDKAMPHDNHFIVAAADYAPESTHAEASYC 209
           +K +L+  S  Y  ++K    D HF+VA  D+AP  T    + C
Sbjct: 344 LKNYLDMISSKYSFWNKTGGSD-HFLVACHDWAPSETRQYMAKC 386


>At1g48560.1 68414.m05430 expressed protein
          Length = 643

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = +1

Query: 133 CHMITTSSWPPLTTPQNRLTRKPATVNTLTQPYESIRSTNTS*DTCNSKTRSKH 294
           CH +  S      +P+N+L     +  TL +      S N + + C+  T   H
Sbjct: 360 CHTLACSVRKKYASPRNKLDSSIISAKTLNEQSLGRNSLNGTRENCSEYTLESH 413


>At1g14250.1 68414.m01687 nucleoside phosphatase family protein /
           GDA1/CD39 family protein low similarity to SP|P97687
           Ectonucleoside triphosphate diphosphohydrolase 1 (EC
           3.6.1.5) (Ecto-apyrase) {Rattus norvegicus}; contains
           Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase)
           family
          Length = 488

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 218 RVLTVAGFRVSRFWGVVSGGHDEVVIMW 135
           RVL  +GF+    W  V  G DE +  W
Sbjct: 174 RVLRSSGFKFQDEWATVISGTDEGIYAW 201


>At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) similar
           to sodium/calcium exchanger protein [Mus musculus]
           gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 415

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 227 GCVRVLTVAGFRVSRFWGV 171
           G + V+T + FRV RFWG+
Sbjct: 376 GSLLVITWSRFRVPRFWGI 394


>At3g17180.1 68416.m02191 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase II SP:P08819
           [Triticum aestivum] (Carlsberg Res. Commun.
           52:297-311(1987))
          Length = 478

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 151 KWLSCGIALS*YSSDADSRCFLIGSR 74
           K +  G+ +  YS DAD R  +IGSR
Sbjct: 382 KLIKAGLKIWVYSGDADGRVPVIGSR 407


>At1g37045.1 68414.m04623 hypothetical protein
          Length = 180

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 82  LLRNTWSPRRNCTTIRRCHMITTSSWPPLT 171
           L   TW    N T +R+C  +T  + P LT
Sbjct: 148 LTDTTWVSIHNNTNLRKCRRLTEQNRPRLT 177


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,552,898
Number of Sequences: 28952
Number of extensions: 133677
Number of successful extensions: 402
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)