Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1402
(711 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 3e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 195 3e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 195 3e-50
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 4e-50
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0) 93 2e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 73 2e-13
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 68 7e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 4e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 8e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 4e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 38 0.006
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 35 0.057
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.70
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.70
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 30 2.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.1
SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.9
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 6.5
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 28 8.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 195 bits (476), Expect = 3e-50
Identities = 101/132 (76%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P P A
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 174
Query: 614 ILRLDLAGRDLT 649
ILRLDLAGRDLT
Sbjct: 175 ILRLDLAGRDLT 186
Score = 111 bits (267), Expect = 5e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMKILTERGYSFT
Sbjct: 187 DYLMKILTERGYSFT 201
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 195 bits (476), Expect = 3e-50
Identities = 101/132 (76%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P P A
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 174
Query: 614 ILRLDLAGRDLT 649
ILRLDLAGRDLT
Sbjct: 175 ILRLDLAGRDLT 186
Score = 112 bits (270), Expect = 2e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMKILTERGYSFT
Sbjct: 187 DYLMKILTERGYSFT 201
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 195 bits (476), Expect = 3e-50
Identities = 101/132 (76%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P P A
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 175
Query: 614 ILRLDLAGRDLT 649
ILRLDLAGRDLT
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (285), Expect = 4e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMKILTERGYSFT
Sbjct: 188 DYLMKILTERGYSFT 202
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 194 bits (474), Expect = 4e-50
Identities = 100/132 (75%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTA 613
REKMTQIMFETFN+PAMYVAIQAV S + + V+ T P P A
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHA 175
Query: 614 ILRLDLAGRDLT 649
I+RLDLAGRDLT
Sbjct: 176 IIRLDLAGRDLT 187
Score = 114 bits (274), Expect = 8e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMKILTERGYSFT
Sbjct: 188 DYLMKILTERGYSFT 202
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAV 140
Score = 114 bits (274), Expect = 8e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/33 (81%), Positives = 30/33 (90%), Gaps = 2/33 (6%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFHTVPIYE--GYA 600
+SLYASGRTTGIV+DSGDGV HTVPIYE GY+
Sbjct: 141 LSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 112 bits (270), Expect = 2e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH 609
+SLYASGRTTGIV+DSGDGV HTVPIYEGYALPH
Sbjct: 103 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 136
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 NREKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPT 610
N + M +IMFETFN+PAMYVAIQAV S + + V+ T P P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPH 136
Query: 611 AILRLDLAGRDLT 649
AI+RLDLAGRDLT
Sbjct: 137 AIIRLDLAGRDLT 149
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMKILTERGYSFT
Sbjct: 150 DYLMKILTERGYSFT 164
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (254), Expect = 2e-23
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 388
S + G + L+ DEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATV 565
VLLTE PLNP NREKM ++MFE + +Y+AIQAV + + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 566 SSTPCPSTRDTHSPTAILRLDLAGRDLTR 652
+ CP P RLD+AGRD+T+
Sbjct: 164 THI-CPVYEGFALPHLTRRLDIAGRDITK 191
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 108 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/103 (49%), Positives = 62/103 (60%)
Frame = +2
Query: 341 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCT 520
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 521 RPVVPPVSCWTPATVSSTPCPSTRDTHSPTAILRLDLAGRDLT 649
+ + S P P A R+DLAGRDLT
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLT 2231
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +2
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVS 568
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 569 STPCPSTRDTHSPTAILRLDLAGRDLTR 652
S P P +I+R D+AGRD++R
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH 609
+SLYASGRTTG+V DSGDGV H VPIYEGYALPH
Sbjct: 19 LSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPH 52
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/65 (47%), Positives = 34/65 (52%)
Frame = +2
Query: 455 IMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTAILRLDLA 634
IMFE FN+PA+YVAIQAV + S P P AILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 635 GRDLT 649
GRDLT
Sbjct: 61 GRDLT 65
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 651 DYLMKILTERGYSFT 695
DYLMK++TERGYSFT
Sbjct: 66 DYLMKLMTERGYSFT 80
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 478
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 479 PAMYVAIQAV 508
PA ++ +V
Sbjct: 63 PAFFLCKNSV 72
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +1
Query: 502 SRVSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH---RHPASG 627
S ++ +A+GR+ G+V+DSG VP+++GY L R P +G
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 84 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPH 609
+SLYASG T G+ L SG IYEG+ L H
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNH 803
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 406
DEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 535 TGIVLDSGDGVFHTVPI 585
TG V+DSGDGV H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 535 TGIVLDSGDGVFHTVPIYEGYAL 603
TG V+DSGDGV H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKP-CLAVRVRSYHRYR-AGLRRRCLPHRAHLRGIRTPPPPSC 620
C +P C P + C VR R + AG R RC+P RA + ++ PP +C
Sbjct: 230 CKMIGNKPRCMRPPQTDCSEVRCRGNSICKVAGGRARCVPLRATCKRVKCTPPQTC 285
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.075
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 212 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 96
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.099
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 215 GRDGRYGTEGLLCRDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 385
GR G + GL ++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 386 EEHPVLLTEAPLNPKANRE 442
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +2
Query: 515 CTRPVVPPVSCWTPATVSSTPC-----PSTRDTHSP 607
CT+ +P +TP T TPC PST +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 449 TQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTP 577
+Q+ E +N P+ + + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 507
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 333 SSQLVTI--PCSMGYLRV-RIPLLLCASSLHKSPSVPYRP 223
S LV++ P S Y + RIP LC SL PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNE 370
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAV 182
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 486 CTSPSKPCLAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPPPSCV-WTWPVVTSQDYLM 662
C S+PCL V + ++C + +R PP P + +T +T L+
Sbjct: 74 CAQESQPCLTVAQAILFNAKVEPAKKCKTGQTRHTKLREPPLPLYIGFTVHAMTRSKSLI 133
Query: 663 KILTERGYSFTYHR 704
L + G S Y R
Sbjct: 134 TKLYQLGVSVAYQR 147
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 260 HLYI--RVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYY 117
H+Y+ R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 31 HVYLIYRLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 465 KHSTRPPCT-SPSKPCLAVRVRSYHRYR-AGLRRRCLPHRAHLRGIRTPPPPS 617
+H PP T SP PC+ + HR+ PH H PPPP+
Sbjct: 35 RHHLPPPATASPPTPCIVIISHPLHRHHPPPPASSSFPHSLHR---HHPPPPA 84
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = +2
Query: 500 QAVSRCTRPVVPPVSCWTPATVSSTPCPSTRDTHSPTAILRLDLAGRDLTRLPHEDP 670
+A C R VPPVS +P PC P + ++ G+ P + P
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTCKVQDDGKPACVCPSKCP 693
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 321 VTIPCSMGYLRVRIPLLLCASSLHKSPSVP 232
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 512 RCTRPVVPPVSCWTPATVSSTPCPSTRDTHS-PTAILRLDLAGRDLTRLPHEDPHRARLL 688
R PV P +PA+ TP P+ R T + T LDL G++ + + +++
Sbjct: 395 RGVAPVQPSGINQSPAS-RPTPPPNKRGTEALKTPTTSLDLLGQEFLQNQKQQQKHKQVV 453
Query: 689 VHLPPPS 709
+ LPP S
Sbjct: 454 LPLPPAS 460
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 416 PLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSSTPCPSTRD 595
PL P +N + NTP S RP PP SC + TP P +
Sbjct: 56 PLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPP-SCQSNTPRPLTPPPRQSN 114
Query: 596 THSPTA 613
T P A
Sbjct: 115 TTQPPA 120
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 367
+GR+ G+ +CR +A ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 594 SLVDGHGVEDTVAGVQHDTGG--TTGRVQRDTAWMATY 487
+L GHGV G TGG + GRV +W+ Y
Sbjct: 581 TLFSGHGVISASGGAGSGTGGGGSGGRVAAHVSWLREY 618
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +1
Query: 373 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRVSLYASGRTTGIVLD 552
ACR R PR P P+ + ++D D +I R P R + +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 553 SGDGVFHTVPI 585
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 515 CTRPVVPPVSCWTPATVSSTPCPSTRDTHSPT 610
C+RP PPV+ T +T SST +T T + T
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTST 650
>SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1254
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 482 AMYVAIQAVSRC--TRPVVPPVSCWTPATVSSTPCPSTRDTHSPT 610
A Y I +RC TRP P S P ++ +TR +H PT
Sbjct: 14 AYYQTISQSNRCVTTRPSHTPTSALLPDHLTRQQVRTTRPSHMPT 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,374,472
Number of Sequences: 59808
Number of extensions: 633889
Number of successful extensions: 2549
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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