Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1401
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FHN6 Cluster: Monocopper oxidase-like protein SKS2 pr...    37   0.35 
UniRef50_Q115I5 Cluster: Putative uncharacterized protein; n=1; ...    36   0.61 
UniRef50_Q54MT4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q8S7R1 Cluster: Putative receptor protein kinase; n=3; ...    33   4.3  
UniRef50_Q504M1 Cluster: Tarsh protein; n=5; Euteleostomi|Rep: T...    33   7.5  
UniRef50_Q18QA8 Cluster: 2-hydroxyglutaryl-CoA dehydratase, D-co...    33   7.5  
UniRef50_Q0UAJ1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A0YEM8 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 
UniRef50_A0CVT5 Cluster: Chromosome undetermined scaffold_299, w...    32   10.0 

>UniRef50_Q9FHN6 Cluster: Monocopper oxidase-like protein SKS2
           precursor; n=6; Magnoliophyta|Rep: Monocopper
           oxidase-like protein SKS2 precursor - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 592

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +1

Query: 343 TKLNFTDYSVKVNKNYPETSDQRDNRLNYEQALASVARLNYELEQSVTGSGKLHYAS 513
           +++NFTD+ V V ++Y        N  +    +AS   +N  + Q VTG G LHY++
Sbjct: 256 SQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSN 312


>UniRef50_Q115I5 Cluster: Putative uncharacterized protein; n=1;
           Trichodesmium erythraeum IMS101|Rep: Putative
           uncharacterized protein - Trichodesmium erythraeum
           (strain IMS101)
          Length = 664

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
 Frame = +1

Query: 184 LKIIAYKWIS-DEVLKIIVVRGGRCRSAMLLVETPREAAVPPCAAPLD---LPMSTLTKL 351
           L++ +Y  +S  EV +++  RG   R     V+   +  +PP   P +   + +S +++ 
Sbjct: 550 LEVFSYYPLSMKEVFQLLEKRGINTRVCQEKVQAILDGKLPPGLIPSEEDLMLLSEVSRQ 609

Query: 352 NFTDYSVKVNKNYPETSDQRDNRLNYEQA 438
           NF   S+K N  + +  D     LNYEQA
Sbjct: 610 NFYYQSLKANPLFDQKIDSSKYELNYEQA 638


>UniRef50_Q54MT4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 257

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 202 CMRL-FLINYNFPERTLITSSNRMSFFFNNKSV*NYFALNFKFRFNKIN 59
           C+ L  + NYNF   T IT+ + M+ F N  +V  YF +N     N+IN
Sbjct: 107 CVNLPTMFNYNFNSTTTITTESPMNSF-NTDNVNQYFQMNLISSLNEIN 154


>UniRef50_Q8S7R1 Cluster: Putative receptor protein kinase; n=3;
           Oryza sativa|Rep: Putative receptor protein kinase -
           Oryza sativa subsp. japonica (Rice)
          Length = 383

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 22/50 (44%), Positives = 25/50 (50%)
 Frame = -2

Query: 383 LFTLTL*SVKFSFVSVDMGRSRGAAHGGTAASRGVSTSSIADRHRPPRTT 234
           LF L L S+ FSF S+  GR RGA  G  A    V   +  DR  PP  T
Sbjct: 5   LFLLPLLSLSFSFCSLSYGRPRGARAG--ANKLRVGAKNRFDRRIPPDLT 52


>UniRef50_Q504M1 Cluster: Tarsh protein; n=5; Euteleostomi|Rep:
           Tarsh protein - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis)
          Length = 1516

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
 Frame = +1

Query: 298 VPPCAAP-LDLPMSTLTKLNFTDYSVKVNKNYPETSD--QRDNRLNYEQ--ALASVARLN 462
           +PP ++P LDL M  +T +     S  + +N+PE+SD  Q+   +  +Q   LA +   +
Sbjct: 651 IPPTSSPFLDLTMK-ITSIPGVQLSTSLAENFPESSDLPQQSTNMPLKQRTTLAEIVPES 709

Query: 463 YELEQSVTGSGKLHYASRTDWHTIPQWTPCAPTLLTS 573
            ++ Q+ T   KLH   RT   T  + +   P  ++S
Sbjct: 710 TDVPQAST--DKLHTHYRTTEATKDKQSMYIPATISS 744


>UniRef50_Q18QA8 Cluster: 2-hydroxyglutaryl-CoA dehydratase,
           D-component; n=5; Bacteria|Rep: 2-hydroxyglutaryl-CoA
           dehydratase, D-component - Desulfitobacterium hafniense
           (strain DCB-2)
          Length = 335

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
 Frame = +1

Query: 211 SDEVLKIIVVRGGRCRSAMLLVETPREAAVP--PCAAPLDLPMSTLTKLNFTDYSVKVNK 384
           S E+ KI+ V  G C +   L+ET  E  +   P A P D     + +L        +  
Sbjct: 66  SPEIKKIVAVTQGDCSNTHALMETWSEEGIEIIPFAFPYDRD-GDMLRLQLEKLITALGT 124

Query: 385 NYPETSDQRDNRLNYEQALASVARLNYELEQSVTGSGKLHYASRTDWHTIPQ 540
            + +  +Q+       Q    + RL ++  Q       LH  S +D++  P+
Sbjct: 125 TWDQVREQKVRLDQVRQLAWEIDRLTWQENQVRGFENHLHLVSCSDFNGDPE 176


>UniRef50_Q0UAJ1 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 716

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 529 TIPQWTPCAPTLLTSYK 579
           T+P W  C PTLLT+YK
Sbjct: 409 TVPDWDDCCPTLLTAYK 425


>UniRef50_A0YEM8 Cluster: Putative uncharacterized protein; n=1;
           marine gamma proteobacterium HTCC2143|Rep: Putative
           uncharacterized protein - marine gamma proteobacterium
           HTCC2143
          Length = 268

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 256 RSAMLLVETPREAAVPPCAAPLDLPMSTLTKLNFTDYSVKVNKNYPETSD 405
           R  +L V+      +P    P+D PMS     N  D +   +KNYP  +D
Sbjct: 111 RKWVLAVDKVANGKLPKRYRPIDYPMSKFAVENVADEATLSDKNYPRMND 160


>UniRef50_A0CVT5 Cluster: Chromosome undetermined scaffold_299,
           whole genome shotgun sequence; n=12; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_299,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1708

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 319 LDLPMSTLTKLNFTDYSVKVNKNYPETSDQRDNRLNYEQALASVARLNYELEQSVT 486
           LD  +  + K N  DY +K+     +  D +D  +NY   + SV    +  E S+T
Sbjct: 428 LDEDIRKILKTNTDDYFLKLVSQLQQFCDNQDVHVNYLSQVLSVIEQEFSFENSIT 483


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,279,882
Number of Sequences: 1657284
Number of extensions: 9667558
Number of successful extensions: 30407
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30400
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)