Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1401
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 472 EQSVTGSGKLHYASRTDWHTIPQWTPCAPT 561
           E+++ G G++      +  ++PQ  P  PT
Sbjct: 167 EEALQGDGRMRQHVMHNLSSVPQPQPVLPT 196


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 446 ASLGLIMN*SNR*LVRESYTMRAEQIGIR 532
           ++LG+    +N  L+R+   + AEQ+G R
Sbjct: 329 SNLGIFPKTTNEQLLRKELLLFAEQMGQR 357


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 26  KLRAHRTIKIGIYLVESEFKV 88
           K++  RT+KIG+Y     F +
Sbjct: 560 KMQPLRTLKIGVYRNIKNFNI 580


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 472 EQSVTGSGKLHYASRTDWHTIPQWTPCAPT 561
           E+++ G G++      +  ++PQ  P  PT
Sbjct: 167 EEALQGDGRMRQHVMHNLSSVPQPQPVLPT 196


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 472 EQSVTGSGKLHYASRTDWHTIPQWTPCAPT 561
           E+++ G G++      +  ++PQ  P  PT
Sbjct: 167 EEALQGDGRMRQHVMHNLSSVPQPQPVLPT 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,748
Number of Sequences: 336
Number of extensions: 2366
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)