Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1401
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB242827-1|BAE72693.1|  365|Homo sapiens Pex26pL153V/fs/Ter prot...    33   1.1  
BC046200-1|AAH46200.1|  251|Homo sapiens chromosome 17 open read...    31   4.5  

>AB242827-1|BAE72693.1|  365|Homo sapiens Pex26pL153V/fs/Ter
           protein.
          Length = 365

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 421 LNYEQALASVARLNYELEQSVTGSGKLHYASRTDWHTIPQWTPCAPTLLTS 573
           + ++ A  S     Y+L Q   GSG+LH+ + T   ++ +  PCAP  L S
Sbjct: 267 VRFDPASPSSLHFLYKLAQLFAGSGRLHFLASTSSASVTE-GPCAPQPLCS 316


>BC046200-1|AAH46200.1|  251|Homo sapiens chromosome 17 open reading
           frame 82 protein.
          Length = 251

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 338 VDMGRSRGAAHGGTAASRGVSTSSIADRHRPPR 240
           +D G  R A HGGTA   G + S    RHRPPR
Sbjct: 212 IDCG-PRQAGHGGTATDTGRAGSGA--RHRPPR 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,953,669
Number of Sequences: 237096
Number of extensions: 1463968
Number of successful extensions: 3340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3340
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)