Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1400
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 58 2e-08
AF200424-1|AAF24342.1| 877|Drosophila melanogaster Short stop/K... 52 6e-07
U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p... 32 0.95
AF427493-1|AAL25117.1| 306|Drosophila melanogaster protein phos... 32 0.95
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P... 32 0.95
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA... 29 5.1
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 57.6 bits (133), Expect = 2e-08
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +1
Query: 52 KSVVTEPSVTSMTIKKNTIELPRGGWTLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALK 231
KS E +VT I +ELP GGW L +AI F+P TG+F + GTDR+++ EE +
Sbjct: 2126 KSSYIEQNVTERQI----MELPPGGWRLKDAIEQRLFNPDTGVFHVQGTDRLVNFEECIN 2181
Query: 232 LNLINPESQKSLTP 273
+IN S + P
Sbjct: 2182 KQIINNLSLSVIDP 2195
Score = 55.2 bits (127), Expect = 9e-08
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 497 RDHVPRDLEI----EEQVALEPVQVAPGVIFDPATALVISTPSGVSENIIEAAYNGTVAP 664
+D P+ +E+ E + EP+Q+APG I+DP+TALVI T +G +ENI +AA G V
Sbjct: 2273 KDAPPKFVEVLTCQRELASPEPLQIAPGAIYDPSTALVIFTQTGETENIFDAARQGLVDE 2332
Query: 665 DTVK 676
+K
Sbjct: 2333 QLIK 2336
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 261 VIDPKTRKEMPLDKALELRLIDHVGRYKYITETIT-MLQAI-ESKYIV-FIHLTQSVSSQ 431
VIDP T ++ + A E ++D G Y + + M AI ESK I+ + T+ + +
Sbjct: 2192 VIDPNTGDKISVQSAFERDILDSYGNYTNSRKQVQGMRSAIDESKIILETVPATRGANQK 2251
Query: 432 KVITITSVAGMPDKMEIS 485
++ IT V +PD +E+S
Sbjct: 2252 TILRITKVNNIPDVLEVS 2269
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 130 TLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSLTPK 276
+L + + +DP+T F I D+ LDL+ A+ LINPE L PK
Sbjct: 4022 SLVDCLLRGLYDPSTAKFTID--DKQLDLKAAIAQKLINPEELVLLDPK 4068
Score = 31.9 bits (69), Expect = 0.95
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 115 PRGGWTLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPES 255
P+ +L +A++ +DP TG F T L E A++ +++P+S
Sbjct: 4114 PKRKRSLPDAVYRGLYDPKTGQFSNTVTREKLTTERAIRRGILDPDS 4160
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 130 TLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSLTPKLV 282
++ EAI + DP G + P L L EAL+ ++ P +K P V
Sbjct: 4074 SITEAIAKGYLDPIEGYVINPYASTKLSLHEALENRILIPPKRKRSLPDAV 4124
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 130 TLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINP 249
++ AIH FD TG P T R + L E+++ ++NP
Sbjct: 4315 SIQRAIHQGLFDDKTGKLSDPRTGRQITLLESMRSFVVNP 4354
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 130 TLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSL 267
T EA+ F D +F P T + +++AL L+ P+S +++
Sbjct: 2017 TFTEAVRQGFIDEERQLFKDPKTGNIYSVQQALNYGLLVPDSNQTV 2062
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 133 LNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPES 255
L EA+ N +D G FV P + L+ EAL NL++ S
Sbjct: 4217 LIEAVVKNVYDEVDGHFVDPKSGEKLNFAEALNTNLLDEHS 4257
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 133 LNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSLTPK 276
L EAIH F DP T +F T + L L EA++ I+ + PK
Sbjct: 4540 LIEAIHSGFIDPATTVFKNQLTGKELPLTEAIENGDIDVSKGRVFDPK 4587
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 139 EAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSLTPKL 279
+ ++ N DP TG + P T + L+ A++ I PE L+ L
Sbjct: 1938 DLVYHNLIDPKTGYLLDPKTGETVPLDTAIERKFITPEGALLLSSLL 1984
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 127 WTLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPES 255
W+L E + ++ P+TG + P T + L++A+++ + E+
Sbjct: 3926 WSLPELLQREYYTPSTGKVLNPVTGEEILLQQAIEMGFVELET 3968
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +1
Query: 94 KKNTIELPRGGWTLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLI 243
+K+ +E+P G A+ + +P+ + + P T + L +++A++ N I
Sbjct: 2636 QKSKVEIPPVGMIFPVAVEKSLVEPSKRVVLHPSTKKALPIKQAIEENFI 2685
>AF200424-1|AAF24342.1| 877|Drosophila melanogaster Short
stop/Kakapo truncated isoformprotein.
Length = 877
Score = 52.4 bits (120), Expect = 6e-07
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +1
Query: 52 KSVVTEPSVTSMTIKKNTIELPRGGWTLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEAL 228
KS E +VT I +ELP GGW L +AI F+P TG+F + GTDR+++ EE +
Sbjct: 787 KSSYIEQNVTERQI----MELPPGGWRLKDAIEQRLFNPDTGVFHVQGTDRLVNFEECI 841
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 130 TLNEAIHLNFFDPTTGMFVIPGTDRVLDLEEALKLNLINPESQKSL 267
++ EA+ F D +F P T + +++AL L+ P+S +++
Sbjct: 678 SIPEAVRQGFIDEERQLFKDPKTGNIYSVQQALNYGLLVPDSNQTV 723
>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
protein homolog protein.
Length = 3190
Score = 31.9 bits (69), Expect = 0.95
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 669 VSGATVPL*AAS-IIFSETPEGVDMTKAVAGS--NITPGATCTGSKATCSSISRSRGT 505
+ + VP +AS + S TP T A +GS N + GAT G+ +T SS S GT
Sbjct: 1383 IPASPVPATSASGLAASSTPASAAATCASSGSGSNSSSGATAAGASSTSSSSSAGSGT 1440
>AF427493-1|AAL25117.1| 306|Drosophila melanogaster protein
phosphatase 1 catalyticsubunit protein.
Length = 306
Score = 31.9 bits (69), Expect = 0.95
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 312 LRLIDHVGRYKYITETITMLQAIESKYIVFIHL 410
L L D+V R KY ET+T+L A + +Y IHL
Sbjct: 82 LMLGDYVDRGKYSVETLTLLLAYKVRYPTSIHL 114
>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
protein.
Length = 3276
Score = 31.9 bits (69), Expect = 0.95
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 669 VSGATVPL*AAS-IIFSETPEGVDMTKAVAGS--NITPGATCTGSKATCSSISRSRGT 505
+ + VP +AS + S TP T A +GS N + GAT G+ +T SS S GT
Sbjct: 1383 IPASPVPATSASGLAASSTPASAAATCASSGSGSNSSSGATAAGASSTSSSSSAGSGT 1440
>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
protein.
Length = 1201
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 693 SLRFNDFTVSGATVPL*AASIIFSETPEGVDMTKAVAGSNITPGATCTGSKATCSS 526
SL + T + + P+ AAS + + P + +VA +N G+ T + +TC S
Sbjct: 959 SLAAVNATQAAKSTPVAAASALVASAPPAKSTSASVAKTNTNAGSKPTATLSTCKS 1014
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,974,837
Number of Sequences: 53049
Number of extensions: 533836
Number of successful extensions: 1404
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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