Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1395
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Q7Q0 Cluster: Putative uncharacterized protein; n=3; ...    35   2.0  
UniRef50_Q4XUT8 Cluster: Putative uncharacterized protein; n=4; ...    34   2.7  
UniRef50_O04238 Cluster: Transcription factor; n=1; Vicia faba v...    33   4.7  
UniRef50_A6S7P9 Cluster: Predicted protein; n=1; Botryotinia fuc...    33   4.7  
UniRef50_UPI0000499DF6 Cluster: hypothetical protein 4.t00064; n...    33   6.2  
UniRef50_Q2GLQ0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  
UniRef50_A6C0G8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  
UniRef50_Q22YS8 Cluster: Deoxyribonuclease II family protein; n=...    33   8.2  

>UniRef50_Q4Q7Q0 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 325

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 178 AKYKQKSAAFDRRTSPTK--LSGSTTCSQYQPAYQTNYQQPIAMQXQALQPNYL 333
           A+YKQ++AA     +PTK    G  T  Q + A QT  +   A+Q +A++PN L
Sbjct: 248 AEYKQRAAAIGEPAAPTKEMSKGELTQLQQKLAKQTMDKNRRALQLKAMEPNPL 301


>UniRef50_Q4XUT8 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1674

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 152 LAQQQVEGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTK-LITNNQS 298
           +A QQ   +Q IN N  +L+ E A  NYL +   V  N LTK  + NN++
Sbjct: 778 MASQQKHYEQTININKHMLLNELARNNYLFESNFVENNNLTKNPLYNNET 827


>UniRef50_O04238 Cluster: Transcription factor; n=1; Vicia faba var.
           minor|Rep: Transcription factor - Vicia faba var. minor
          Length = 828

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 514 EEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQP 621
           +E +N +PQ  QPQP RTTS L  +   S +A   P
Sbjct: 791 QEAQNSRPQGPQPQPGRTTSQLNVLIANSRNAHNPP 826


>UniRef50_A6S7P9 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 576

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query: 83  PLQVEQKPXGFDGPAHFAAFPSVLAQQQVEGQQNINRNP---PLLIGEQAPPNYLVQQPA 253
           P Q+ +   G   PA+ AA    L      G Q ++ NP   P+    Q P +YL +  A
Sbjct: 60  PSQLLEARRG-SSPAYAAALSQYLGPINPRGHQRLSTNPIPAPIFDQVQMPESYLRRTNA 118

Query: 254 VSTNLLTKLITNNQSLCXHKHXSQ 325
            ST  L++   NN +   H   +Q
Sbjct: 119 ESTQPLSRTRNNNTAGLDHPARAQ 142


>UniRef50_UPI0000499DF6 Cluster: hypothetical protein 4.t00064; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 4.t00064 - Entamoeba histolytica HM-1:IMSS
          Length = 751

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 143 PSVLAQQQVEGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNNQS 298
           P +L Q   + QQN+N+ P   I +Q   N +  QP   TN    +   NQ+
Sbjct: 279 PQILQQINPQLQQNLNQQPQHTIPQQLSSNIINTQPQQQTNKQQPITNPNQN 330


>UniRef50_Q2GLQ0 Cluster: Putative uncharacterized protein; n=1;
           Anaplasma phagocytophilum HZ|Rep: Putative
           uncharacterized protein - Anaplasma phagocytophilum
           (strain HZ)
          Length = 673

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 443 NHSK*TSPLNSXAQPAQESENSIGKRLKISNLKFINLNLTELPATLSISAACLXQQPVNP 622
           +H+  T PL +       S +SIG  L+  NL+   +  T  P +  + A+ L Q+  NP
Sbjct: 522 SHTGKTHPLLNVPTEQYASCSSIGDVLESQNLQPTQIPSTRTPESSDLPASLLSQELPNP 581

Query: 623 VSGTT 637
           + G T
Sbjct: 582 LPGNT 586


>UniRef50_A6C0G8 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 283

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 256 QYQPAYQTNYQQPIAMQXQALQPNYLAPNSE 348
           Q Q  YQ  YQQP  +Q Q  QP Y  P  +
Sbjct: 216 QQQAPYQQQYQQPAPLQQQYRQPQYQQPQPQ 246


>UniRef50_Q22YS8 Cluster: Deoxyribonuclease II family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Deoxyribonuclease II
           family protein - Tetrahymena thermophila SB210
          Length = 765

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -1

Query: 171 STCC*ASTEGKAAKCAGPSNPXGFCSTCSGWT*LSLICCKGTNCGCSCS*ANEARYN 1
           +TC     +     C+ P NP   C TC G   L+ I  +  NCG  C+   E+  N
Sbjct: 592 NTCLPYQCDKSCLTCSSPYNPQS-CLTCKGGYYLNKITKQCMNCGIDCAQCIESADN 647


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,475,619
Number of Sequences: 1657284
Number of extensions: 10100386
Number of successful extensions: 28474
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28426
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)