Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1395
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    26   0.32 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   9.1  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 172 RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQALQPNYLAP 339
           +S+K K KSA    +TSPT +S +   S    A   +      ++     PNY+ P
Sbjct: 139 KSSKLKNKSAPILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLRD---SPNYIKP 191


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 534 LDIFNLFPILFSDSWAGCAXELSGL 460
           LD+ N+    F  SWAG   + S L
Sbjct: 193 LDVINVMTYDFHGSWAGVTAQNSPL 217


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 534 LDIFNLFPILFSDSWAGCAXELSGL 460
           LDI N+    F   WAG   E S L
Sbjct: 194 LDIINVMTYDFHAMWAGFTAENSPL 218


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 535 PQVYQPQPXRTTSNLKYISRLSXSATRQPS 624
           P ++   P   T+N K  ++   S+ +QPS
Sbjct: 58  PSLFPFSPCNNTANYKSEAQNQPSSYKQPS 87


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 502 EQYREEVENIQPQVYQPQPXRTTSNLKYI 588
           E+Y  E E   P  Y P+      N  Y+
Sbjct: 96  EKYFPEPEKFDPNRYLPENQAKRHNYAYV 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,738
Number of Sequences: 336
Number of extensions: 2516
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)