Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1395
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_50425| Best HMM Match : Colicin_Pyocin (HMM E-Value=7) 29 2.6
SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.5
SB_52203| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 4.5
SB_49270| Best HMM Match : RVT_1 (HMM E-Value=1.4) 29 4.5
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_31296| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.5
SB_28588| Best HMM Match : SAM_PNT (HMM E-Value=2.3) 29 4.5
SB_28037| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 29 4.5
SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.5
SB_15659| Best HMM Match : DUF1299 (HMM E-Value=6.4) 29 4.5
SB_14996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 29 4.5
SB_1266| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5) 29 4.5
SB_41821| Best HMM Match : Borrelia_orfA (HMM E-Value=2.7) 29 4.5
SB_39194| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 29 4.5
SB_31940| Best HMM Match : DUF1299 (HMM E-Value=3.1) 29 4.5
SB_24004| Best HMM Match : EGF (HMM E-Value=5.7e-14) 29 4.5
SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8) 29 4.5
SB_18136| Best HMM Match : SpoIIP (HMM E-Value=4.4) 29 4.5
SB_14130| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2) 29 4.5
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_25309| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 28 7.9
SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_10462| Best HMM Match : DUF1299 (HMM E-Value=6.4) 28 7.9
>SB_847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1058
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITN 289
E NI + P LLI N+ +PA NLL K I N
Sbjct: 838 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINN 877
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 291 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 331
>SB_8256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 454 INQPTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATR 615
+ QP R +S R ++ R N + Y PQP RTTS + + ++ + A++
Sbjct: 21 LTQPLDQLRVSSSRTSDRGRGTARNNYSR-YSPQPGRTTSRVHHSNQKTTEASK 73
>SB_50425| Best HMM Match : Colicin_Pyocin (HMM E-Value=7)
Length = 209
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +2
Query: 497 SENSIGKRLKISNLKFINLNLTELPATLSISAA-----CLXQQP--VNPVSGTTFFLPQL 655
S N + K+ + SN L + PA+ ++S A CL P VNPVS TT FLP
Sbjct: 120 SHNPLEKQRRTSN----TLAGFKRPASSTVSVAIPDQQCLVNPPTNVNPVSSTTRFLPGA 175
Query: 656 IS 661
+S
Sbjct: 176 VS 177
>SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 628
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 20 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 60
>SB_52203| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 611
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 3 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 43
>SB_49270| Best HMM Match : RVT_1 (HMM E-Value=1.4)
Length = 594
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 190 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 230
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 454 INQPTQFXRATSPRIREQYREEVE 525
I QP +F +AT+ +R+ YRE VE
Sbjct: 1702 IRQPVEFRKATTNLLRDGYREIVE 1725
>SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 460 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 500
>SB_31296| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 707
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_28588| Best HMM Match : SAM_PNT (HMM E-Value=2.3)
Length = 202
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 3 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 43
>SB_28037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 21 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 61
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 467 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 507
>SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 671
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 30 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 70
>SB_15659| Best HMM Match : DUF1299 (HMM E-Value=6.4)
Length = 236
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_14996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 169 EDTDNIKKEPKLLIPADKTANFYKLEPATYKNLLEKEINKS 209
>SB_1266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 454 INQPTQFXRATSPRIREQYREEVE 525
I QP +F +AT+ +R+ YRE VE
Sbjct: 11 IRQPVEFRKATTNLLRDGYREIVE 34
>SB_44405| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
Length = 325
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_41821| Best HMM Match : Borrelia_orfA (HMM E-Value=2.7)
Length = 616
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 155 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 195
>SB_39194| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 603
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_31940| Best HMM Match : DUF1299 (HMM E-Value=3.1)
Length = 294
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_24004| Best HMM Match : EGF (HMM E-Value=5.7e-14)
Length = 808
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 245 EDTDNIKKEPTLLIPADKTTNFYKLEPATYKNLLEKEINKS 285
>SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8)
Length = 996
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 832 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 872
>SB_18136| Best HMM Match : SpoIIP (HMM E-Value=4.4)
Length = 399
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_14130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 139
>SB_3833| Best HMM Match : Borrelia_orfA (HMM E-Value=1.2)
Length = 594
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 354 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEINKS 394
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLI 283
E NI + P LLI N+ +PA NLL K I
Sbjct: 897 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEI 934
>SB_25309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLI 283
E NI + P LLI N+ +PA NLL K I
Sbjct: 99 EDTDNIKKEPKLLIPADKTTNFYKLEPATYKNLLEKEI 136
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 457 NQPTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKY 585
N P F + R+ +RE VE + ++ +P P +Y
Sbjct: 5 NLPKTFRKLVVSRLSTNFREAVETVSAKMLEPGPEEVLVKTRY 47
>SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 123 GPSNPXGFCSTCSGWT 76
G S G CS+CSGWT
Sbjct: 176 GASGRNGTCSSCSGWT 191
>SB_10462| Best HMM Match : DUF1299 (HMM E-Value=6.4)
Length = 199
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 170 EGQQNINRNPPLLIGEQAPPNYLVQQPAVSTNLLTKLITNN 292
E NI + P LLI N+ +PA NLL K I +
Sbjct: 23 EDTDNIKKEPKLLIPADKITNFYKLEPATYKNLLEKEINKS 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,423,061
Number of Sequences: 59808
Number of extensions: 319708
Number of successful extensions: 871
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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