Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1395
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF348997-1|AAO32957.1|   61|Homo sapiens MTE protein.                  32   1.6  
AY685922-1|AAT94123.1|   64|Homo sapiens glioma amplified sequen...    31   4.9  
AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated prot...    30   8.5  
AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated prot...    30   8.5  

>AF348997-1|AAO32957.1|   61|Homo sapiens MTE protein.
          Length = 61

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -1

Query: 180 C*PSTCC*ASTEGKAAKCAGPSNPXGFCSTCS-GWT*LSLIC-CKGTNCGCSC 28
           C  S+ C  +T  K+ +C   S     CS C  G    +  C CKGT+  CSC
Sbjct: 7   CSTSSSCTCTTSSKSRECKCTSCKTSCCSCCPVGCAKCAQGCVCKGTSDKCSC 59


>AY685922-1|AAT94123.1|   64|Homo sapiens glioma amplified sequence
           64 protein.
          Length = 64

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 236 LVQQPAVSTNLLTKLITNNQSLCXHKHXSQTIWLL 340
           LV+ P +S + L++L  N QSL  H H    IW L
Sbjct: 26  LVRWPLLSLHGLSQLEDNLQSLTKHPHWKNKIWFL 60


>AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated protein
           5-11 protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -1

Query: 162 C*ASTEGKAAKCAGPSNPXGFCSTCSGWT*LSLICCKGTNC---GCSCS 25
           C +   G  + C G  +  G C  C     + + CCK   C    CSCS
Sbjct: 38  CGSGCGGCGSGCGGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPACSCS 86


>AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -1

Query: 162 C*ASTEGKAAKCAGPSNPXGFCSTCSGWT*LSLICCKGTNC---GCSCS 25
           C +   G  + C G  +  G C  C     + + CCK   C    CSCS
Sbjct: 38  CGSGCGGCGSGCGGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPACSCS 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,449,221
Number of Sequences: 237096
Number of extensions: 1608385
Number of successful extensions: 3722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3707
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)