SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1395
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF034856-1|AAB87987.1|  534|Drosophila melanogaster EF-hand prot...    31   1.1  
AE014134-2102|AAF53125.2|  371|Drosophila melanogaster CG31757-P...    31   1.9  
X67703-2|CAA47938.1|   74|Drosophila melanogaster Mst84Db protein.     29   4.3  
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot...    29   5.7  
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot...    29   5.7  
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit...    29   5.7  
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit...    29   5.7  
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me...    29   5.7  
BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p pro...    29   5.7  
AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p pro...    29   5.7  
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE...    29   5.7  
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC...    29   5.7  
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB...    29   5.7  
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD...    29   5.7  
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA...    29   5.7  
AE014297-606|AAF54024.1|   74|Drosophila melanogaster CG17934-PA...    29   5.7  
AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-P...    29   5.7  
AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p pro...    29   7.5  
AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-P...    29   7.5  
BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p pro...    28   9.9  
BT022368-1|AAY54784.1|  329|Drosophila melanogaster IP11514p pro...    28   9.9  
AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p pro...    28   9.9  
AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc fi...    28   9.9  
AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA...    28   9.9  
AE014296-523|AAN12223.1|  329|Drosophila melanogaster CG32846-PA...    28   9.9  
AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,...    28   9.9  
AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,...    28   9.9  
AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,...    28   9.9  

>AF034856-1|AAB87987.1|  534|Drosophila melanogaster EF-hand protein
           NUCB1 protein.
          Length = 534

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 80  QPLQVEQKPXGFDGPAHFAAFPSVLAQQQVEGQQNI-NRNPPLLIGEQAPPNYLVQQPAV 256
           QP+Q +QKP                AQQQ   QQ I N++PP ++ +Q P     +Q   
Sbjct: 469 QPVQQQQKPVQQPVQQQPVQQQQQTAQQQPVAQQQIHNQSPPPVLNQQVPVQQQQKQHQE 528

Query: 257 STN 265
           S N
Sbjct: 529 SLN 531


>AE014134-2102|AAF53125.2|  371|Drosophila melanogaster CG31757-PA
           protein.
          Length = 371

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +1

Query: 454 INQPTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIR 630
           I QP    +     +RE   EE  +  P    P P  +TS L   +  S SAT +PS +
Sbjct: 223 IAQPAPKLQPALETVRESVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATAEPSAK 281


>X67703-2|CAA47938.1|   74|Drosophila melanogaster Mst84Db protein.
          Length = 74

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
 Frame = -1

Query: 228 GGACSPIKSGGFLFIFC*PSTCC*ASTE--GKAAKCAGPSNPXGFCSTCSG 82
           GG C P    G     C P   C A     G    C G   P G C  C G
Sbjct: 16  GGPCGPCGPCGPCGSCCSPCGSCCAPWGPCGPCGPCCGGCGPCGLCGPCCG 66


>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
            trxI protein.
          Length = 3358

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2100 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2159

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2160 QPQLLFQSS 2168


>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
            trxII protein.
          Length = 3726

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2468 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2527

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2528 QPQLLFQSS 2536


>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3358

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2100 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2159

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2160 QPQLLFQSS 2168


>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3726

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2468 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2527

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2528 QPQLLFQSS 2536


>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
            D.melanogaster zinc-binding protein (trithorax) mRNA,
            complete cds. ).
          Length = 3759

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2501 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2560

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2561 QPQLLFQSS 2569


>BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p
           protein.
          Length = 1657

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
 Frame = +1

Query: 466 TQFXRATSPRIREQYRE-EVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRH--- 633
           T    A S R +E   E ++E ++P+  Q +  +T ++L   +R++ +  R P+ +H   
Sbjct: 54  TSSRSARSRRQQEHLGEPDMELVEPETLQRETLKTLNDLLQRARITNAKNRSPAEQHLSS 113

Query: 634 --HFFPAPADQSR 666
             H  PA   Q R
Sbjct: 114 KDHRSPAQQQQQR 126


>AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p
           protein.
          Length = 834

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 454 INQPTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIR 630
           I QP    +     +RE   +E  +  P    P P  +TS L   +  S SAT +PS +
Sbjct: 223 IAQPAPKLQPALETVRESVMKESPSKDPGDKGPPPPASTSTLTSQTTTSSSATAEPSAK 281


>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
            isoform E protein.
          Length = 3358

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2100 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2159

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2160 QPQLLFQSS 2168


>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
            isoform C protein.
          Length = 3358

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2100 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2159

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2160 QPQLLFQSS 2168


>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
            isoform B protein.
          Length = 3358

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2100 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2159

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2160 QPQLLFQSS 2168


>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
            isoform D protein.
          Length = 3726

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2468 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2527

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2528 QPQLLFQSS 2536


>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
            isoform A protein.
          Length = 3726

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 142  PFCTRSATG*RSAKYKQKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQ-AL 318
            P  T +    + A  KQ+      +  P +        Q+Q   QT  QQPI +  Q  L
Sbjct: 2468 PLKTVATKAAQQAAVKQRQLKSGHQVKPIQAKLQPHPQQHQQQQQTQVQQPITVMGQNLL 2527

Query: 319  QPNYLAPNS 345
            QP  L  +S
Sbjct: 2528 QPQLLFQSS 2536


>AE014297-606|AAF54024.1|   74|Drosophila melanogaster CG17934-PA
           protein.
          Length = 74

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
 Frame = -1

Query: 228 GGACSPIKSGGFLFIFC*P--STCC*ASTEGKAAKCAGPSNPXGFCSTCSG 82
           GG C P    G     C P  S C      G    C G   P G C  C G
Sbjct: 16  GGPCGPCGPCGPCGSCCSPCGSCCAPCGPCGPCGPCCGGCGPCGPCGPCCG 66


>AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-PA,
           isoform A protein.
          Length = 1657

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
 Frame = +1

Query: 466 TQFXRATSPRIREQYRE-EVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRH--- 633
           T    A S R +E   E ++E ++P+  Q +  +T ++L   +R++ +  R P+ +H   
Sbjct: 54  TSSRSARSRRQQEHLGEPDMELVEPETLQRETLKTLNDLLQRARITNAKNRSPAEQHLSS 113

Query: 634 --HFFPAPADQSR 666
             H  PA   Q R
Sbjct: 114 KDHRSPAQQQQQR 126


>AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p
           protein.
          Length = 61

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -1

Query: 144 GKAAKCAGPSNPXGFCSTC-SGW 79
           G  + C GP  P G CS+C  GW
Sbjct: 39  GCCSPCCGPCGPCGGCSSCPCGW 61


>AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-PA
           protein.
          Length = 61

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -1

Query: 144 GKAAKCAGPSNPXGFCSTC-SGW 79
           G  + C GP  P G CS+C  GW
Sbjct: 39  GCCSPCCGPCGPCGGCSSCPCGW 61


>BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p
           protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 296 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 355

Query: 643 PAPA 654
           P PA
Sbjct: 356 PTPA 359


>BT022368-1|AAY54784.1|  329|Drosophila melanogaster IP11514p
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 190 QKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQALQPN 327
           Q +       +   LS +   S     YQ+N+QQP  M+ Q  QP+
Sbjct: 54  QNTCQMSPNLAAQSLSPAVPVSSLSDYYQSNWQQPQQMELQNQQPH 99


>AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p
           protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 296 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 355

Query: 643 PAPA 654
           P PA
Sbjct: 356 PTPA 359


>AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc
           finger protein protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 296 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 355

Query: 643 PAPA 654
           P PA
Sbjct: 356 PTPA 359


>AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA
            protein.
          Length = 1637

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 215  LRSKAADFCLYFADLQPVAERVQKGR 138
            LR   +D+C+Y AD+  V  +VQ+ R
Sbjct: 1584 LRLNVSDYCIYQADMMSVVAQVQETR 1609


>AE014296-523|AAN12223.1|  329|Drosophila melanogaster CG32846-PA
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 190 QKSAAFDRRTSPTKLSGSTTCSQYQPAYQTNYQQPIAMQXQALQPN 327
           Q +       +   LS +   S     YQ+N+QQP  M+ Q  QP+
Sbjct: 54  QNTCQMSPNLAAQSLSPAVPVSSLSDYYQSNWQQPQQMELQNQQPH 99


>AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,
           isoform C protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 296 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 355

Query: 643 PAPA 654
           P PA
Sbjct: 356 PTPA 359


>AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,
           isoform A protein.
          Length = 1486

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 296 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 355

Query: 643 PAPA 654
           P PA
Sbjct: 356 PTPA 359


>AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,
           isoform D protein.
          Length = 1582

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 463 PTQFXRATSPRIREQYREEVENIQPQVYQPQPXRTTSNLKYISRLSXSATRQPSIRHHFF 642
           PT+   A +PR  E  +++ +     VY+P    T    K IS  +  A   P+      
Sbjct: 392 PTKKHVAIAPRTPEMKQQQQQGKAAMVYRPPVTSTALKQKQISPPAPVAAHTPAPAPALN 451

Query: 643 PAPA 654
           P PA
Sbjct: 452 PTPA 455


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,788,159
Number of Sequences: 53049
Number of extensions: 507008
Number of successful extensions: 1823
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -