Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1393
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.6  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   6.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 324 LVAVWLRCYTAAGTCARGPATPS 392
           +V ++L  Y  A TC +   TPS
Sbjct: 300 VVEIYLLVYACASTCEQANDTPS 322


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 324 LVAVWLRCYTAAGTCARGPATPS 392
           +V ++L  Y  A TC +   TPS
Sbjct: 300 VVEIYLLVYACASTCEQANDTPS 322


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 405 RIIVEKEWLALGHKFQQRCNI 343
           ++  EK W+AL   + + C++
Sbjct: 257 KVTSEKSWIALNDDYNRLCHL 277


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +3

Query: 459 ISVQLTSHPSSRDNSTENLXHLTSPPQHQ 545
           +   L+ HPS  D    NL H      HQ
Sbjct: 287 LGTMLSIHPSKLDVEQMNLLHSNDLNMHQ 315


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 339 ATPQQGFTPTF 307
           ATPQ G TPT+
Sbjct: 180 ATPQAGSTPTY 190


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 546 SGAVVDLLDVQGSLCCCPWKTDG 478
           +G V  + D  G +C CP  T+G
Sbjct: 387 NGGVCRISDGGGYICDCPSGTNG 409


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 454 VSSDLPGALLQDAGRVPDHRREGV 383
           +  D+P AL  +  +  D  +EG+
Sbjct: 58  LKKDIPDALKNECAKCNDKHKEGI 81


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 338 APMLHRCWNLCPRASHSFSTMIRNPSSVL 424
           A ML+ CW  CP+   +F+ + ++   +L
Sbjct: 725 AVMLN-CWKECPKNRPTFTELSKSLEGLL 752


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 507 ENLXHLTSPPQHQTV*NKLSGAA 575
           EN+ H    P + T+  + +GAA
Sbjct: 174 ENIIHFCGDPNNVTIFGESAGAA 196


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 507 ENLXHLTSPPQHQTV*NKLSGAA 575
           EN+ H    P + T+  + +GAA
Sbjct: 174 ENIIHFCGDPNNVTIFGESAGAA 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,345
Number of Sequences: 336
Number of extensions: 2357
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)