Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1392
         (322 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   0.34 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   2.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   4.2  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    20   7.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   7.3  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.34
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 188 HRQDHRGWRRFFQHFLQRDRSWQHVPR 268
           +R++ +GW+   +H L  ++ +  VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 102 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 194
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 201 IGGGDDSFNTFFSETGAGSTY 263
           +GGGD S N+      A  TY
Sbjct: 112 LGGGDTSPNSALQRARADKTY 132



 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 188 HRQDHRGWRRFFQHFLQRDRSWQHVPR 268
           +RQ+ + W+   +H L  +  +  VPR
Sbjct: 177 YRQNQQRWQNSIRHSLSFNDCFVKVPR 203


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 135 CWELYCLEHGIQPDGQMPTDKT 200
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 210 HPRWSCLWASGHQAGXRAPGSKAPS 136
           HP+W   W S  ++   +P + AP+
Sbjct: 78  HPQWPFAWGSLXRSS--SPQTSAPT 100


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 79  CVSASLFTLAKPE 117
           C+ A++FT  KP+
Sbjct: 14  CLLAAIFTCVKPQ 26


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 159 HGIQPDGQMPTDKTI 203
           HGIQP   +P+ + +
Sbjct: 169 HGIQPSPTLPSKEEV 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,513
Number of Sequences: 336
Number of extensions: 1487
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)