Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1392
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 133 3e-32
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 130 2e-31
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 116 5e-27
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 81 1e-16
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 52 1e-07
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 2e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 47 3e-06
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 46 5e-06
03_01_0034 + 318432-318825,318902-319851 45 1e-05
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 44 2e-05
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 44 3e-05
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 44 3e-05
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 44 3e-05
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 0.62
08_01_0312 + 2764744-2767390,2767632-2767990 29 0.81
03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544 29 0.81
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 29 0.81
07_03_1395 - 26255776-26256043,26256194-26256414,26256550-262567... 28 1.4
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 28 1.4
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 1.9
07_01_0284 - 2082249-2082256,2082496-2083009 27 3.3
05_04_0280 - 19752112-19752451,19754104-19755587 27 3.3
01_06_1609 + 38621264-38621386,38621521-38621578,38621778-386220... 27 3.3
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 27 3.3
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 4.3
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 27 4.3
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 26 5.7
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 26 5.7
12_02_1023 + 25393555-25393901,25396224-25396368 26 7.6
10_08_0555 + 18738330-18738599 26 7.6
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 26 7.6
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 26 7.6
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 26 7.6
01_03_0029 - 11784446-11784756,11785295-11786576 26 7.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 133 bits (322), Expect = 3e-32
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTG 81
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 130 bits (314), Expect = 2e-31
Identities = 55/81 (67%), Positives = 64/81 (79%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTG 81
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 116 bits (278), Expect = 5e-27
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTG 81
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 81.4 bits (192), Expect = 1e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 194
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2
Query: 212 RRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDE 307
R F F S +HVPRA+FVDLEPT +DE
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDE 137
Score = 32.3 bits (70), Expect = 0.087
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 189 TDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXXMKVRTG 320
+D T G D+FNTFFSET +G P +V+TG
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTG 141
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = +3
Query: 60 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 239
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 240 ETGAGSTYPVXXXXXXXXXXXMKVRTG 320
E G P VRTG
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTG 259
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.0 bits (109), Expect = 2e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 236
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 47.2 bits (107), Expect = 3e-06
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 248
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 249 AGSTYPVXXXXXXXXXXXMKVRTG 320
G P VRTG
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTG 79
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 46.4 bits (105), Expect = 5e-06
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P VRTG
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTG 79
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 258 TYP 266
P
Sbjct: 59 FVP 61
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +2
Query: 260 VPRAVFVDLEPTXVD---EGPHWH 322
VPRAV +DLEP +D GP+ H
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGH 83
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 258 TYP 266
P
Sbjct: 59 HVP 61
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
+HVPRAV +DLEP +D
Sbjct: 58 RHVPRAVLMDLEPGTMD 74
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRAV +DLEP +D
Sbjct: 58 RYVPRAVLMDLEPGTMD 74
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRAV +DLEP +D
Sbjct: 58 RYVPRAVLMDLEPGTMD 74
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 258 TYP 266
P
Sbjct: 59 FVP 61
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 29.5 bits (63), Expect = 0.62
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 217 SSPPPMVLSVGIWPSGWXPCSR 152
S P P+ LS I SGW PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 0.81
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 178 ARCPQTRPSGVETILSTLSSARPE 249
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544
Length = 136
Score = 29.1 bits (62), Expect = 0.81
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 TXSSLMARCPQ-TRPSGVETILSTLSSARPELAARTP 267
T S LMA C + P + ++ LSSA P AA TP
Sbjct: 40 TLSLLMALCDRGANPEALAALVRELSSAAPPTAATTP 76
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.1 bits (62), Expect = 0.81
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 214 SPPPMVLSVGIWPSGWXPCSR 152
+P P+ LSV + SGW PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>07_03_1395 -
26255776-26256043,26256194-26256414,26256550-26256786,
26257476-26257776,26258027-26258106
Length = 368
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 204 RWSCLWASGHQAGXRAPGSKAPSRHYRSGLRLGQREQRCTHA 79
R S W SG A + PS R+G R G+ E+ HA
Sbjct: 17 RSSPRWLSGSGCDTAAAAAPGPSGEERTGRRSGEEEEEEEHA 58
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 211 PPPMVLSVGIWPSGWXPCSR 152
P P+ LS I SGW PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 121 RSVMPAGSFTAWSTXSSLMARCPQTRPSGVETILSTLSSARPE 249
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 250 APVSLKKVLKESSPPPMVLSVGIWPSGWXPCSRQ*SSQQALPI 122
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 313 RTFINXSRFKIDEDSTGYVLPAPVSLKKVLKESSPPPMVLSVGIWPSGWXPCS 155
R + R + +T + PAP + SS PP + WPS W P +
Sbjct: 7 RPLLPLLRRHLHRSATVHRSPAPAPPDGIPSSSSAPPDPAAAR-WPSSWSPAA 58
>01_06_1609 +
38621264-38621386,38621521-38621578,38621778-38622013,
38622536-38622652,38622690-38622798,38622973-38623064,
38623191-38623265,38623333-38623421,38623576-38623625,
38623830-38623870,38623963-38624172,38624278-38624345,
38624434-38624494,38624607-38624840
Length = 520
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 200 HRGWRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGPHWH 322
+ W FFQ+F+++ W+H + D+ + H H
Sbjct: 183 YSSWLYFFQNFIEQIHQWKHWENDIQKDVAQNAPKKVTHVH 223
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 205 PMVLSVGIWPSGWXPCSR 152
P+ LS I SGW PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 4.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 129 NACWELYCLEHGI 167
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 76 KCVSASLFTLAKPESRSVMPAGSFTAWSTXS--SLMARCPQT--RPSGVETILSTLSSAR 243
+ ++ S F++A+P + + PA + T S + A P T P+ T +T S A+
Sbjct: 72 RTLAQSSFSIAEPAAVATEPAAAATEPPPPSIRTAAASSPTTPTEPTAASTEHATASPAQ 131
Query: 244 PELAARTP 267
P L TP
Sbjct: 132 PPLTPVTP 139
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 99 HVGQAGVQIGNACWELYCLEHGIQPDGQMP 188
H G V++ AC+ L L++G + DG P
Sbjct: 373 HEGDGSVEVDEACFYLMGLDYGPKRDGFGP 402
>03_05_0136 +
21158917-21159939,21160183-21160241,21160259-21160294,
21160345-21160387,21160582-21160698,21162090-21162179,
21162329-21162436,21162547-21162588
Length = 505
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 79 CVSASLFTLAKPESRSVMPAGSFTAWSTXSSLMARCPQTRPSGV 210
C F A E+R V+ A S S M P TRP+GV
Sbjct: 120 CTELPRFADADAEARKVVVARSGGHASAIGRSMRLLPSTRPAGV 163
>12_02_1023 + 25393555-25393901,25396224-25396368
Length = 163
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 295 SRFKIDEDSTGYVLPAPVSLKKVLKESSPPPMVLSVGIWPSGWXPCS 155
+ F+I +LPAP K + P+V++ + P+G P +
Sbjct: 36 TNFRIPPPPVAPLLPAPAVANKKMDSKRKKPVVVAEMVAPAGVEPAA 82
>10_08_0555 + 18738330-18738599
Length = 89
Score = 25.8 bits (54), Expect = 7.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 204 RWSCLWASGHQAGXRAPG 151
RW+ WA G + G +PG
Sbjct: 51 RWTAAWADGSEKGKGSPG 68
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 152 AVKLPAGITDLDSGLANVNRDALTHFD 72
A+ +PAG + GLA RD + H D
Sbjct: 238 ALAVPAGQGEASPGLALARRDGVAHLD 264
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 177 GQMPTDKTIGGGDDSFNTFF 236
GQMP+ +GG FNT+F
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 174 DGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 266
DG++PTD G D N S+ A P
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSP 373
>01_03_0029 - 11784446-11784756,11785295-11786576
Length = 530
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 244 VSLKKVLKESSPPPMVLSVGIW 179
VS LK SS PP + S GIW
Sbjct: 6 VSAGSPLKASSSPPPLCSFGIW 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,968,477
Number of Sequences: 37544
Number of extensions: 191655
Number of successful extensions: 685
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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