Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1392
(322 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 137 2e-33
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 136 3e-33
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 136 4e-33
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 135 7e-33
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 7e-33
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 1e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 3e-32
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 133 3e-32
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 8e-32
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-09
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 45 2e-05
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 45 2e-05
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 42 1e-04
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.068
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.48
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.84
SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081) 27 2.6
SB_4034| Best HMM Match : Exo_endo_phos (HMM E-Value=9.7e-06) 27 2.6
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 27 2.6
SB_32833| Best HMM Match : RVT_1 (HMM E-Value=2) 27 2.6
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 27 3.4
SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32) 27 3.4
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 27 4.5
SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 26 5.9
SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36) 26 7.9
SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
SB_19357| Best HMM Match : Metallothio_5 (HMM E-Value=3.4) 26 7.9
SB_6620| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38) 26 7.9
SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
SB_33317| Best HMM Match : DUF1317 (HMM E-Value=9.7) 26 7.9
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 137 bits (332), Expect = 2e-33
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTG 81
Score = 135 bits (327), Expect = 7e-33
Identities = 61/80 (76%), Positives = 64/80 (80%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 261 YPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 495 VPRAVFVDLEPTVVDEVRTG 514
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 136 bits (330), Expect = 3e-33
Identities = 63/83 (75%), Positives = 65/83 (78%)
Frame = +3
Query: 72 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 251
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 252 GSTYPVXXXXXXXXXXXMKVRTG 320
G P +VRTG
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTG 145
Score = 136 bits (328), Expect = 5e-33
Identities = 61/81 (75%), Positives = 65/81 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTG 666
Score = 134 bits (323), Expect = 2e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 261 YP 266
P
Sbjct: 574 VP 575
Score = 34.7 bits (76), Expect = 0.017
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPT 295
F F + +HVPRAVFVDLEPT
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPT 585
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 136 bits (329), Expect = 4e-33
Identities = 61/81 (75%), Positives = 65/81 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTG 81
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 135 bits (327), Expect = 7e-33
Identities = 61/80 (76%), Positives = 64/80 (80%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 261 YPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 VPRAVFVDLEPTVVDEVRTG 80
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 135 bits (327), Expect = 7e-33
Identities = 61/81 (75%), Positives = 65/81 (80%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 258 TYPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTG 81
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 134 bits (325), Expect = 1e-32
Identities = 61/80 (76%), Positives = 64/80 (80%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 261 YPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 866 VPRAVFADLEPTVVDEVRTG 885
Score = 133 bits (321), Expect = 3e-32
Identities = 59/80 (73%), Positives = 64/80 (80%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAG
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 261 YPVXXXXXXXXXXXMKVRTG 320
P +VRTG
Sbjct: 433 VPRAVFVDLEPTVIDEVRTG 452
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 133 bits (322), Expect = 3e-32
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 260
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 261 YPVXXXXXXXXXXXMKVRTG 320
P ++RTG
Sbjct: 480 VPRAVFVDLEPSVIDEIRTG 499
Score = 105 bits (252), Expect = 8e-24
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = +3
Query: 123 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXX 302
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 303 MKVRTG 320
+VRTG
Sbjct: 61 DEVRTG 66
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 133 bits (321), Expect = 3e-32
Identities = 57/63 (90%), Positives = 59/63 (93%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
F F + +HVPRAVFVDLEPT V P
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVALSP 79
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 132 bits (318), Expect = 8e-32
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 258 TYP 266
P
Sbjct: 61 HVP 63
Score = 33.9 bits (74), Expect = 0.030
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 221 FQHFLQRDRSWQHVPRAVFVDLEPTXV 301
F F +HVPRAVFVDLEP+ V
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVV 75
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 111 bits (266), Expect = 2e-25
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 254
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +G
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASG 254
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 56.4 bits (130), Expect = 5e-09
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +3
Query: 183 MPTDKTIGGGDDSFNTFFSETGAGSTYPVXXXXXXXXXXXMKVRTG 320
MP+DKTIGGGDDSFNTFF+ETGAG P ++RTG
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTG 46
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +3
Query: 63 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 242
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 243 TGAGSTYP 266
G P
Sbjct: 267 ATGGKYVP 274
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRAV VDLEP +D
Sbjct: 271 KYVPRAVLVDLEPGTMD 287
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRA+ VDLEP +D
Sbjct: 58 KYVPRAILVDLEPGTMD 74
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 78 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 257
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 258 TYP 266
P
Sbjct: 59 YVP 61
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRA+ VDLEP +D
Sbjct: 58 KYVPRAILVDLEPGTMD 74
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 32.7 bits (71), Expect = 0.068
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVDE 307
++VPRAV VDLEPT +DE
Sbjct: 971 KYVPRAVLVDLEPTVIDE 988
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.9 bits (64), Expect = 0.48
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 213 LHPRWSCLWASGHQAGXRAPGSKAPSRHYRSGLRLGQ 103
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 0.84
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 138 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 242
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081)
Length = 754
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -2
Query: 234 RKC*KNRLHPRWSCLWASGHQAGXRAPGSKAPSRHYRSGLRLGQREQRCTHAF 76
+KC + L WS ++ R P S+ + S R G+ + TH F
Sbjct: 631 KKCNRGTLSKNWSGPYSPDRVGKRRVPNSRVWPKDKESSKRKGKDREDQTHCF 683
>SB_4034| Best HMM Match : Exo_endo_phos (HMM E-Value=9.7e-06)
Length = 609
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR ++ H L + SW H DL P EGP
Sbjct: 381 WREYYNHLLNVEFSWSH------EDLPPAYPVEGP 409
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 184 CPQTRPSGVETILSTLSSARPELAARTP 267
CP RPSG T SA+P+ A R P
Sbjct: 476 CPTLRPSGFGDNTCTQPSAKPKPAPRPP 503
>SB_32833| Best HMM Match : RVT_1 (HMM E-Value=2)
Length = 317
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR ++ H L + SW H DL P EGP
Sbjct: 32 WREYYNHLLNVEFSWSH------EDLPPAYPVEGP 60
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 254 QHVPRAVFVDLEPTXVD 304
++VPRAV VDLEP +D
Sbjct: 3 KYVPRAVLVDLEPGTMD 19
>SB_289| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.5e-32)
Length = 773
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 313 RTFINXSRFKI-DEDSTGYVLPAPVSLKKVLKE 218
R + + S F++ D TGY LP P+S KV+ +
Sbjct: 574 RPYWDWSNFEVMDRVETGYRLPPPMSCPKVIHQ 606
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 81 RECISVHVGQAGVQIGNACWELYCLEHGIQP 173
+ C S + +GV+ G W L + GIQP
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQP 267
>SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
Length = 799
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 271 STGYVLPAPVSLKKVLKESSPP-----PMVLSVGIWPSGW 167
+TGY P LK V E SP V+S +WPS W
Sbjct: 755 ATGYDNIPPRFLKPVANEISPSLTRIFNRVISDSVWPSDW 794
>SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36)
Length = 1346
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR + H L + SW H DL P EGP
Sbjct: 928 WREHYNHLLNVEFSWSH------EDLPPAYPVEGP 956
>SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/43 (27%), Positives = 16/43 (37%)
Frame = +2
Query: 176 WPDAHRQDHRGWRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVD 304
W D H ++ R + W V VFV + PT D
Sbjct: 39 WHDTHSRERAAVERITYQVMNAFSKWAAVTSLVFVRVPPTSRD 81
>SB_19357| Best HMM Match : Metallothio_5 (HMM E-Value=3.4)
Length = 187
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 186 ASGHQAGXRAPGSKAPSRHYRSGLRLGQREQRC 88
A+G + R P SK +RH RSG+RL + C
Sbjct: 108 AAGTKRRKRTPPSKQ-ARHDRSGVRLSDGKDVC 139
>SB_6620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 183 MPTDKTIGGGDDSFNTFFSETGAGSTYPV 269
+ D TI DD +N + AGS YP+
Sbjct: 683 LKADYTINCFDDRYNKYVKFAYAGSVYPI 711
>SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR + H L + SW H DL P EGP
Sbjct: 464 WREHYNHLLNVEFSWSH------EDLPPAYPVEGP 492
>SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38)
Length = 622
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR + H L + SW H DL P EGP
Sbjct: 69 WREHYNHLLNVEFSWSH------EDLPPAYPYEGP 97
>SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 55 HRKKLKSKCVSASLFTLAKPESRSVMPAGSFTAWSTXSSLMARCPQTRPSGVETILSTLS 234
++ K + + + S AK + R ++ G+F AW T + + +R GV LS
Sbjct: 631 YKVKRQLRQLRPSCIATAKWDERLLLILGAFLAWETRNVTIPALNDSRNIGVSVYTVVLS 690
>SB_33317| Best HMM Match : DUF1317 (HMM E-Value=9.7)
Length = 171
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 209 WRRFFQHFLQRDRSWQHVPRAVFVDLEPTXVDEGP 313
WR + H L + SW H DL P EGP
Sbjct: 43 WREHYNHLLNVEFSWSH------EDLPPAYPVEGP 71
>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 47 HLSIEKNSNQNA*VHLCSRWPSRSP 121
HLS E Q V+ C RW R P
Sbjct: 466 HLSREVGRGQYGVVYACDRWAGRHP 490
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,948,314
Number of Sequences: 59808
Number of extensions: 192816
Number of successful extensions: 605
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 425519554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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