Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1392
         (322 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    50   2e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    29   0.032
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    22   4.9  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   6.5  
AY146736-1|AAO12096.1|  131|Anopheles gambiae odorant-binding pr...    22   6.5  
AJ697723-1|CAG26916.1|  131|Anopheles gambiae putative odorant-b...    22   6.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    21   8.6  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    21   8.6  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        21   8.6  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +3

Query: 78  MRECISVHVGQAGVQIGNACWE 143
           MRECISVHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 133 PAGSFTAWSTXSSLMARCPQTRPSGVETILSTLSSARPELAARTPC 270
           P    T WS  S+   RCP+TR S  E +++  + + P LA  + C
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 29.5 bits (63), Expect = 0.032
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 184 CPQTRPSGVETILSTLSSARPELAARTPCCLR 279
           C   RPS ++   ++ S  RP+LAA +  C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 206 GWRRFFQHFLQRDRSW 253
           GW   + HF QR R W
Sbjct: 12  GWLWIYLHFNQRYRFW 27


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 195  KTIGGGDDSFNTFFSET 245
            +TIG  ++SF+++ SET
Sbjct: 1082 QTIGAREESFSSYRSET 1098


>AY146736-1|AAO12096.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP26 protein.
          Length = 131

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/50 (22%), Positives = 18/50 (36%)
 Frame = +1

Query: 37  FNSTFKHRKKLKSKCVSASLFTLAKPESRSVMPAGSFTAWSTXSSLMARC 186
           F  T   +KK +         T   PE+ + +  G F      +   A+C
Sbjct: 17  FALTIDQKKKAEGYAAECVKTTGVPPETAAKLKGGDFAGADDKTKCFAKC 66


>AJ697723-1|CAG26916.1|  131|Anopheles gambiae putative
           odorant-binding protein OBPjj13 protein.
          Length = 131

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/50 (22%), Positives = 18/50 (36%)
 Frame = +1

Query: 37  FNSTFKHRKKLKSKCVSASLFTLAKPESRSVMPAGSFTAWSTXSSLMARC 186
           F  T   +KK +         T   PE+ + +  G F      +   A+C
Sbjct: 17  FALTIDQKKKAEGYAAECVKTTGVPPETAAKLKGGDFAGADDKTKCFAKC 66


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 133  PAGSFTAWSTXSSLMARCPQTRPSGVETILS--TLSSARPELAARTPCCLRRS*TY 294
            P GS   W++ ++ M+       + + T+LS     S++ E+  +   C+  S TY
Sbjct: 1656 PFGSKQKWNSNNNKMSATSMAASAAMHTVLSGPNDGSSQTEMKPKQN-CVNSSNTY 1710


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 135 CWELYCLEHGIQPDGQMPTDKT 200
           CW  Y +   +Q  GQ+P  +T
Sbjct: 466 CWSPYIIFDLLQVFGQIPATQT 487


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 168 GXRAPGSKAPSRHYRSG 118
           G  APGS+   RH R+G
Sbjct: 32  GSPAPGSRHSIRHGRNG 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,202
Number of Sequences: 2352
Number of extensions: 6050
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)