Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1392
         (322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.2  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   2.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   6.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             20   6.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   8.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   8.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   8.4  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 141 PSRHYRSGLR 112
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 175 MARCPQTRPSGVETILSTLSSARPE 249
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 292 RFKIDEDSTGYVLP 251
           R K+DED+ G V P
Sbjct: 301 RLKLDEDADGAVSP 314


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 156 PGSKAPSRHYRSGLRLGQREQRCT 85
           P    P+  +R+GL   QRE   T
Sbjct: 291 PTGYYPTMRFRNGLAFPQRETGAT 314


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 156 PGSKAPSRHYRSGLRLGQREQRCT 85
           P    P+  +R+GL   QRE   T
Sbjct: 291 PTGYYPTMRFRNGLAFPQRETGAT 314


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  SIEKNSNQNA*VHLCSRWPS 112
           SI +NSN++     C R PS
Sbjct: 33  SISRNSNRSESSGYCGRRPS 52


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  SIEKNSNQNA*VHLCSRWPS 112
           SI +NSN++     C R PS
Sbjct: 33  SISRNSNRSESSGYCGRRPS 52


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 186 PTDKTIGGG 212
           PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 186 PTDKTIGGG 212
           PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 186 PTDKTIGGG 212
           PT+ TIGGG
Sbjct: 279 PTEVTIGGG 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,002
Number of Sequences: 438
Number of extensions: 1885
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)