Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1389
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_32854| Best HMM Match : DUF1388 (HMM E-Value=2.9e-23) 30 1.4
SB_53322| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_109| Best HMM Match : Spectrin (HMM E-Value=0.002) 30 1.4
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_6313| Best HMM Match : Spectrin (HMM E-Value=1.1e-08) 29 3.3
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_29890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_38022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 7.5
SB_35209| Best HMM Match : Ank (HMM E-Value=0) 28 7.5
SB_28177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_15637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 27 9.9
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 27 9.9
SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 27 9.9
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 262 QARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAE 438
Q+ E ++ +VA ++ +W+ L +S+ LDDA+ V F N D+ S ++ A+
Sbjct: 3700 QSAEEQDNLDEKVADISRRWDELKSKSNERSSLLDDAISAVAEFQNLRDKFVSWLEEAD 3758
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 2 LTEWVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANE 181
L +W+ E L+ GD + D+H+ F+R+L + +S + +GR I NE
Sbjct: 5630 LLDWLFAVEPSLSTETAVMGDPETVQILIDNHKTFQRELGRREANYQSVMKAGRAMI-NE 5688
Query: 182 PPLSDTSDTE 211
+ + + E
Sbjct: 5689 NKVEEPAALE 5698
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 26 ETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPLSDTS 202
E + + L+P D+ + +Q DD + ++++ED ++ ++L + +A + P +DTS
Sbjct: 4082 EKKADKLSPVGTDVETIEQQMDDLKELQKEVEDIDELI-ADLNDQKYRVALQNPTADTS 4139
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 26 ETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPLSDTSD 205
E ++ L P G +Q DH+A R + PV+ L +G+ + D+S+
Sbjct: 2366 EEQIARLEPVSGLHETAKEQAQDHKAIREAVSQLEPVIAQLLKTGQAIL-------DSSE 2418
Query: 206 TEPSRD 223
P RD
Sbjct: 2419 HGPDRD 2424
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 2 LTEWVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANE 181
L+ W++ N L P ++ Q++ ++QL+ P + + GRQ ++
Sbjct: 2659 LSRWLVSASNLYNLLGPVSARYPIIVDQEEKLADLKKQLKQHSPAYDHVMDKGRQILSTL 2718
Query: 182 PPLSDTSD--TEPSRDSE 229
PP D T+ D+E
Sbjct: 2719 PPTGREHDKLTQKLNDTE 2736
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 5 TEWVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVES 145
T W+ E ++ P D++AL +QQ++ RA + ++ +P E+
Sbjct: 365 TVWLCTVEDRVDRAEPVSHDVSALKEQQEEVRAIKTDVDAHKPTYET 411
>SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 241 RLPVCEEQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELAS 420
RL +E ++ ++ E+A+ + N L +R D W + LDD +QR + + D
Sbjct: 715 RLNQPQETTKQEVGHLKTELAQKEELLNKLSERVDYWNKILDD-LQRKQTEIEAADRKIP 773
Query: 421 RVQAA 435
+VQ +
Sbjct: 774 QVQTS 778
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 283 SIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAEAARSS 453
++ + LAD W+ L D SD + L +A+Q+ + F ++ EL + ++ E A +S
Sbjct: 1868 TVESRLKDLADLWSLLGDLSDNKAQRLKEAIQK-QTFERNVIELQAWIEEVENALAS 1923
>SB_32854| Best HMM Match : DUF1388 (HMM E-Value=2.9e-23)
Length = 171
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 107 RRQLEDKRPVVESNLLSGRQYIANEPPLSD 196
+R L +KRP+ LS ++ +ANE PLS+
Sbjct: 73 KRPLSNKRPLANERPLSNKRPLANERPLSN 102
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 107 RRQLEDKRPVVESNLLSGRQYIANEPPLSD 196
+R L +KRP+ LS ++ +ANE PLS+
Sbjct: 61 KRPLSNKRPLSNKRPLSNKRPLANERPLSN 90
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 110 RQLEDKRPVVESNLLSGRQYIANEPPLSD 196
R L +KRP+ LS ++ +ANE PLS+
Sbjct: 104 RPLANKRPLANKRPLSNKRPLANERPLSN 132
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 101 AFRRQLEDKRPVVESNLLSGRQYIANEPPLSD 196
A +R L +KRP+ LS ++ ++N+ PLS+
Sbjct: 113 ANKRPLSNKRPLANERPLSNKRPLSNKRPLSN 144
>SB_53322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/35 (25%), Positives = 25/35 (71%)
Frame = +1
Query: 274 LARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQ 378
+A +++ ++ ++D+W+ L RS+ W + +D+A++
Sbjct: 44 VAGNLQHQLEVVSDRWSALCQRSEEWQKQVDEALR 78
>SB_109| Best HMM Match : Spectrin (HMM E-Value=0.002)
Length = 365
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/35 (25%), Positives = 25/35 (71%)
Frame = +1
Query: 274 LARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQ 378
+A +++ ++ ++D+W+ L RS+ W + +D+A++
Sbjct: 44 VAGNLQHQLEVVSDRWSALCQRSEEWQKQVDEALR 78
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 13 GHQERDRIERSSTSEGRPHRPPEAAR*SSRLQETVGRQASSGGEQPPQR 159
G +E++RIE+ ++GRP RP S E V + S G+ P +R
Sbjct: 1155 GEKEKERIEK---ADGRPGRPVSGLLEPSDRSEVVPSELSKRGKNPWRR 1200
>SB_6313| Best HMM Match : Spectrin (HMM E-Value=1.1e-08)
Length = 170
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 2 LTEWVIRKETELNALAPPRGDLTALLKQQDDHR 100
+ EW+ R + E+ + P GDL A Q + H+
Sbjct: 138 ILEWISRADEEITSQQPIGGDLEAAQNQNEQHQ 170
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +1
Query: 268 RELARSIRREVAKLAD---KWNTLVDRSDAWGRC-LDDAVQRVRAFTNSL-DELASRVQA 432
+ LA S VA+L D +N + +R ++ R L D ++ + +S+ D+++ +VQA
Sbjct: 2898 KALANSFEGHVAQLTDVREMFNRVRERCNSESRTDLSDRLKFLDNRWHSVRDQISEKVQA 2957
Query: 433 AEAARSSW 456
AEA S W
Sbjct: 2958 AEAEISEW 2965
>SB_29890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +2
Query: 107 RRQLEDKRPVVESNLLSGRQYIANEPPLSD---TSDTEP 214
++ L +K+P+ LLS +Q ++N+ PLS+ SD +P
Sbjct: 72 KQPLSNKQPLSNKQLLSDKQPLSNKQPLSNKQPLSDKQP 110
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 107 RRQLEDKRPVVESNLLSGRQYIANEPPLSD 196
++ L DK+P+ LS +Q ++N+ PLS+
Sbjct: 102 KQPLSDKQPLSNKQPLSNKQPLSNKQPLSN 131
>SB_38022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 160 SAEEVALHHWTLVFQLSPEGAMIILLLQEGGEVSPR 53
+A+E+ WTL+ Q + A +I LQ GG S R
Sbjct: 142 TAQELGAISWTLLAQETAADARMIEFLQPGGSTSSR 177
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 23 KETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPLSDTS 202
K+T ++L L +QQ+DHR+ +LE K V+ LL +ANE + +
Sbjct: 436 KDTIKHSLHMMEEQYKGLRQQQEDHRSTVNELETKLEVLSKKLL-----VANEEKSTHEA 490
Query: 203 DTE 211
+ E
Sbjct: 491 EIE 493
>SB_35209| Best HMM Match : Ank (HMM E-Value=0)
Length = 787
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 371 LYSAYEPSPTLLTSSPAESKQLKR 442
+Y A P T+ TSSPAES+++++
Sbjct: 57 MYKADVPLSTITTSSPAESEKIRK 80
>SB_28177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 161 RQYIANEPPLSDTSDTEPSRDSEGDSRGYRSVRN 262
R+ + E P+ DT++T P+ DS S G R+
Sbjct: 139 RKPLVREYPVGDTTETRPNDDSSWGSTGSSDARD 172
>SB_15637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 386 RTRCTASSKHLPHASLRSTRVFHLSASLATSRR-IERASSR 267
R+R +ASS H HAS ST F + + SRR I +SSR
Sbjct: 590 RSRDSASSIHKGHASDNSTTPFRGTTNCDLSRRYIYHSSSR 630
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 121 RQASSGGEQPPQRK---AVHRQRTTSLRHQ*Y*TISRQRRRLPRLPVCEEQARELARSIR 291
RQ S GE+ + A+ R RT + + R+RR P + +C + R+ +S R
Sbjct: 132 RQGSQRGERERRHHPGVAIRRYRTRQVSQRG----ERERRHHPEVAICRYRTRQTGQSTR 187
Query: 292 R 294
R
Sbjct: 188 R 188
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 181 FVGDVLPSAEEVALHHWTLVFQLSPEGAMIILLLQE 74
FV V+ +A AL HW L +SP+G +I + QE
Sbjct: 1177 FVHQVVRTA---ALTHWALSLDISPKGHLIAIGTQE 1209
>SB_26232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 506 DTASSCARASLASPGPRHED 447
D + AR S ASPG RHED
Sbjct: 13 DVRRNSARRSCASPGNRHED 32
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -2
Query: 395 VKARTRCTASSKHLPHASLRSTRVFHLS----ASLATSRRIERASSRACSSQTGSRGSRL 228
+ +TR S K P SL+++ L ASL TS + +SR S +TG + S
Sbjct: 216 ISLKTRWKTSRKTSPKTSLKTSLKTSLKTSLKASLKTSLKTSLETSRKTSLKTGPKTSTK 275
Query: 227 RCLE 216
LE
Sbjct: 276 TSLE 279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,956,486
Number of Sequences: 59808
Number of extensions: 415477
Number of successful extensions: 1560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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