Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1389
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.1  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   2.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.3  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = +2

Query: 317 SGTPWSTAATRGAGAWMMLYSAYEPSPTLLTSSPAESKQLKRPGLHGEDQATQET 481
           SG+  + A+  G+GA        +P P    SS       +  G+   D A  ET
Sbjct: 397 SGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSET 451


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = +2

Query: 317 SGTPWSTAATRGAGAWMMLYSAYEPSPTLLTSSPAESKQLKRPGLHGEDQATQET 481
           SG+  + A+  G+GA        +P P    SS       +  G+   D A  ET
Sbjct: 397 SGSATNGASNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSET 451


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
 Frame = +1

Query: 25   RDRIERSSTSEGRPHRPPEAAR*SSRL-QETVGRQASSGGEQPPQRKAVHRQRTTSLRHQ 201
            RD ++R+  +     R  E AR +++  Q+    +AS   E   +R    +     L H+
Sbjct: 1416 RDLLQRAEEALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHE 1475

Query: 202  *Y*TISRQRRRLPRLPVCEEQARE---LARSIRREVAKL---ADKWNTLVDRSDAWGRCL 363
                  R  +   RL   E Q R+   L    + +V +    +++  + VD++      +
Sbjct: 1476 ADQLNGRLAKTDNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLI 1535

Query: 364  DDAVQRVRAF-TNSLDELASRVQAAE 438
               +  +R    NSLD+L  R+ AAE
Sbjct: 1536 MSELANLREIDVNSLDDLERRLSAAE 1561


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 451 KTWPLQLLGLC 419
           K+WPLQL G+C
Sbjct: 40  KSWPLQLSGVC 50


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 359 HLPHASLRSTRVFHLSASLAT 297
           +L    LR   VFH SASL+T
Sbjct: 182 NLTQNRLRDLSVFHFSASLST 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,907
Number of Sequences: 2352
Number of extensions: 12382
Number of successful extensions: 50
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)