Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1389
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93396-2|CAB07711.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 1.6
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 29 2.1
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 29 2.1
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 29 2.1
L23647-6|AAK29992.3| 149|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 5.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 5.0
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 5.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 5.0
Z81038-1|CAB02762.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 6.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 6.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 6.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z93396-2|CAB07711.1| 343|Caenorhabditis elegans Hypothetical
protein ZC15.3 protein.
Length = 343
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 124 QASSGGEQPPQRKAVHRQRTTSLRHQ*Y*TISRQRRRLPRLPVCE--EQARELARSIRRE 297
+ SSGG + P +KA Q SLR + + ++R+ + P E + + L +++E
Sbjct: 33 ERSSGGGKSPPKKAPKAQDRMSLRDKFEAAPTTKKRKTAQDPADELLQAIKPLFNQVKKE 92
Query: 298 VA-KLADKWNTLVDRSDAWGRCLDDAVQRVRA 390
+A +LAD+ ++ D D + +++A
Sbjct: 93 MADQLADQLGRFNEQLDMAVNSFSDEIVKLKA 124
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 70 RPPEAAR*SSRLQETVGRQASSGGEQPPQRKAVHRQRTTSLRH 198
RPP S+ Q+TV S + P R A R R+TSLR+
Sbjct: 1442 RPPSRNTRSASAQKTVAANKSVLESEIPSRSASRRTRSTSLRN 1484
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 31 RIERSSTSEGRPHRPPEAAR*SSRLQETVGRQASSGGEQPPQRKAVHRQRTTSLRH 198
++ + S E RP PP AR S Q R +S PP+R A + RH
Sbjct: 161 KLNKESKREKRPRTPPLRARQFSCPQSPTSRHRNS-SFSPPRRHATREVHSRKRRH 215
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 111 DSWKTSVQWWRATSSAEGSTSPTNHLSPTPVILNHLE 221
+ WK +Q R SS E S+S + S +I+NHLE
Sbjct: 691 ECWKAIIQ--RVKSSEEKSSSASKRQSKYEIIMNHLE 725
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 111 DSWKTSVQWWRATSSAEGSTSPTNHLSPTPVILNHLE 221
+ WK +Q R SS E S+S + S +I+NHLE
Sbjct: 691 ECWKAIIQ--RVKSSEEKSSSASKRQSKYEIIMNHLE 725
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 259 EQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQ 378
+Q LA IR ++A+L D W L +++ LDD++Q
Sbjct: 869 QQGHFLAPEIRDKLAQLRDNWRILKSKAEKRRTDLDDSLQ 908
>L23647-6|AAK29992.3| 149|Caenorhabditis elegans Hypothetical
protein ZC262.4 protein.
Length = 149
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +1
Query: 241 RLPVCEEQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELAS 420
R + E+ ++ S +++++A K++ V+ D W + RVRA + ++ AS
Sbjct: 80 RTDIFEQMMKDFVDS--NKLSQIAAKFHGFVESVDDWNLLAECLFSRVRALEHKINLTAS 137
Query: 421 RVQAAEAARSS 453
A + + SS
Sbjct: 138 APMATDPSESS 148
>Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical
protein T09B9.2 protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 247 VAAGVAFAVSRWFSITGVGERWFVGDVLPSAEEVALHHWTLVFQLS 110
+ G+AFAV+ FSI + + +L + + H WT+VF++S
Sbjct: 411 IITGLAFAVASCFSIFN---KLLISQILRTGSK---HEWTIVFEIS 450
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3450 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 3509
Query: 191 SDT 199
+DT
Sbjct: 3510 ADT 3512
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3450 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 3509
Query: 191 SDT 199
+DT
Sbjct: 3510 ADT 3512
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3450 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 3509
Query: 191 SDT 199
+DT
Sbjct: 3510 ADT 3512
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 11 WVIRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPL 190
W+ E+ L + P G Q D+ +A + +E +E++L + Q++ EP
Sbjct: 3995 WLEETESALLSTKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEPQD 4054
Query: 191 SDT 199
+DT
Sbjct: 4055 ADT 4057
>Z81038-1|CAB02762.1| 219|Caenorhabditis elegans Hypothetical
protein C25A1.1 protein.
Length = 219
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +2
Query: 17 IRKETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGRQYIANEPPLSD 196
I K + L PP+ A L ++ + + + VV S + I L
Sbjct: 122 ILKPSTSKVLGPPKSKQAAFLSTAIKRKSTSTEEKKQEDVVSSKVSKPEPVIKQIGALQA 181
Query: 197 TSDTEPSRDSEGDS 238
+ +PS DSE D+
Sbjct: 182 LCEYDPSSDSESDA 195
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 259 EQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAE 438
E+ R IRRE +L + +L A LDD R+ DEL +++ E
Sbjct: 483 EKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLE-TE 541
Query: 439 AARSSWRGPGDARDARAQLDAVSKPE 516
++ R + + RA+LD +++ E
Sbjct: 542 REQADQRDL-EIAECRAKLDEMAEKE 566
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 259 EQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAE 438
E+ R IRRE +L + +L A LDD R+ DEL +++ E
Sbjct: 483 EKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLE-TE 541
Query: 439 AARSSWRGPGDARDARAQLDAVSKPE 516
++ R + + RA+LD +++ E
Sbjct: 542 REQADQRDL-EIAECRAKLDEMAEKE 566
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 259 EQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAE 438
E+ R IRRE +L + +L A LDD R+ DEL +++ E
Sbjct: 243 EKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLE-TE 301
Query: 439 AARSSWRGPGDARDARAQLDAVSKPE 516
++ R + + RA+LD +++ E
Sbjct: 302 REQADQRDL-EIAECRAKLDEMAEKE 326
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 259 EQARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAE 438
E+ R IRRE +L + +L A LDD R+ DEL +++ E
Sbjct: 483 EKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLE-TE 541
Query: 439 AARSSWRGPGDARDARAQLDAVSKPE 516
++ R + + RA+LD +++ E
Sbjct: 542 REQADQRDL-EIAECRAKLDEMAEKE 566
>Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical
protein C15H11.1 protein.
Length = 221
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 KETELNALAPPRGDLTALLKQQDDHRAFRRQLEDKRPVVESNLLSGR-QYIANEPPLSDT 199
++ E +AL PP + + +KQ H+ RQL+ + + N+ S + E P +
Sbjct: 125 EQMEYSAL-PPTPTVASSIKQSTKHKRTERQLQSTQKMSTENITSVQASTTQQECPTQED 183
Query: 200 SDTEPS 217
T P+
Sbjct: 184 DPTAPT 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,158,727
Number of Sequences: 27780
Number of extensions: 290344
Number of successful extensions: 1114
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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