Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1388
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 42 5e-04
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 37 0.015
SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053) 34 0.082
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 31 1.0
SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053) 31 1.0
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 30 1.8
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 29 2.3
SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51) 29 3.1
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 3.5
SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6) 24 3.9
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 4.1
SB_40461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2) 28 5.4
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 5.4
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43438| Best HMM Match : DUF965 (HMM E-Value=0.71) 28 7.1
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 28 7.1
SB_34319| Best HMM Match : C2 (HMM E-Value=0.003) 28 7.1
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 28 7.1
SB_58782| Best HMM Match : Hormone_5 (HMM E-Value=2.1) 27 9.4
SB_51216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87) 27 9.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.4
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 366 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLPLLAE 545
TE+ +R P I+ DVR ++ R+RV ++ ++FREELE ++ +L
Sbjct: 222 TEKGFDRAISTPDQINRDVRGLKLRQRVSIVLGDEVFREELEEIVGSNSCSPGDPLVLER 281
Query: 546 DQRRWSA 566
RWS+
Sbjct: 282 PPPRWSS 288
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 503
+RP D+ DVR ++ R+RV +++ K+ REELE +++
Sbjct: 28 RRPDDVLRDVRGLKLRQRVSLVLNDKVLREELEDIVE 64
>SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053)
Length = 946
Score = 34.3 bits (75), Expect = 0.082
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -2
Query: 456 ELRRASGVPFRGHRRRCRPDAASSARLPPRWTGARCRSGSSLSPSQPFRQLESIDLSSKT 277
E R + + RG RR AA+ R + + A CRSG S S S+ FR + +
Sbjct: 820 EPARCNTLDRRGRRRDSARKAAAGGRTADQGSAA-CRSGDSASRSRTFRHEGPTHICTSV 878
Query: 276 W--VSNPVAQSFRSHAR 232
+ V + V Q ++ H R
Sbjct: 879 YRIVDDAVEQDYKDHHR 895
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 363 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTR 518
+T+EE ER K + D++ E ER+KR EA + REE ER +++ R
Sbjct: 411 TTDEEKERKKSETKNKDSEDEEKERKKR-EAEEEEERRREEEERREEEERKR 461
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 322 RRTQR-RSRTAPGPCPPRRKTSA*SSVRPTSTPMSAK 429
RR +R R R +PGPC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
>SB_31615| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.053)
Length = 870
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 309 VGMAETD-SETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRV 449
+G+ E + E + T P+ E+EDE + + D DA + ++R+KRV
Sbjct: 822 LGILEVELEEPVVEQTNPIDGEDEDEEILEEQQDEDA--KRVKRKKRV 867
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 322 RRTQR-RSRTAPGPCPPRRKTSA*SSVRPTSTPMSAK 429
RR +R R R +PGPC P KT A PTS + AK
Sbjct: 163 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 199
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 322 RRTQR-RSRTAPGPCPPRRKTSA*SSVRPTSTPMSAK 429
RR +R R R +PGPC P KT A PTS + AK
Sbjct: 434 RRGRRDRFRRSPGPCTPVVKTPAVPVRAPTSEEVQAK 470
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 328 TQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLCPRSCSARNWNGSSTS 507
T + AP PR ++ +S TSTP + SA PR+ S + STS
Sbjct: 58 TSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTTTSAPSTS 117
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 208 RYAGPSAGPCMTPEGLCYRITNPGLA*QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA 387
R GP++G TP +PGL +NR ++ ++ R ++ R APG P+ + SA
Sbjct: 654 RPLGPASGG--TPSA---DFISPGLLQHVNRHDVDTYIHRIKQGKRHAPG---PQSRQSA 705
Query: 388 *SSVRPTSTP 417
V TSTP
Sbjct: 706 --KVVKTSTP 713
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 337 RSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLC 462
R + P P PPRRK S S P +TP S C
Sbjct: 800 RKHSDPPPLPPRRKKSHEDSPSPCTTPRRKSTELSRCSPHFC 841
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 318 AETDSETIPNGTGPLSTEEEDERLKQRP--ADIDADVREMERRKRVEALMSSKLFREELE 491
A++D++ T L E L Q + +D++ EMER++ L+ S+ ELE
Sbjct: 570 ADSDAQKFKKLTKELLALERAYALLQAQVGSTMDSEREEMERQQLQSDLIESQARIHELE 629
Query: 492 RVLDQQCTRAATLPLLAEDQRRWSAGEL 575
R+LD A AE +R + EL
Sbjct: 630 RMLDNSSQLVA-----AESERNRAVSEL 652
>SB_31603| Best HMM Match : DUF1279 (HMM E-Value=0.51)
Length = 161
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 312 GMAETDSETIPNGTGPLSTEEED-ERLKQRPADIDADVREMERRKRVEALMSSKLFREEL 488
G+ TD ETI P S +E ER ++R ++ID E+ER R L + K RE +
Sbjct: 5 GVVATDRETIDGPNTPESRRQEARERNEERLSEID----ELERENR--ELENQKPLRERI 58
Query: 489 ERV 497
+ +
Sbjct: 59 KAI 61
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 406 TSTPMSAKWNAGSASKLLCPRSCSARNWNGSSTSNAPG 519
TST A + G+ LL C+ NW S+ PG
Sbjct: 483 TSTSNEASASPGT-DPLLANVGCTPPNWTSSNPGAVPG 519
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 334 RRSRTAPGPCPPRRKTSA*SSVRPTSTPMSA 426
+ S APG P S+ S PTS P S+
Sbjct: 412 QESDPAPGASSPTTSQSSVSEPTPTSKPKSS 442
>SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6)
Length = 298
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 406 TSTPMSAKWNAGSASKLLCPRSCSARNWNGSSTSNAPG 519
TST A + G+ LL C+ NW S+ PG
Sbjct: 147 TSTSNEASASPGT-DPLLANVGCTPPNWTSSNPGAVPG 183
Score = 23.4 bits (48), Expect(2) = 3.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 334 RRSRTAPGPCPPRRKTSA*SSVRPTSTPMSA 426
+ S APG P S+ S PTS P S+
Sbjct: 76 QESDPAPGASSPTTSQSSVSEPTPTSKPKSS 106
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 306 AVGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMER-RKRVEALMSSKLFRE 482
A G+ T S T + + EE+ ERLK+ + RE+++ RK VE E
Sbjct: 1534 AAGVVVTRSVTATLASADVRREEQIERLKE---EFQEKSRELDKMRKEVE---GGGALVE 1587
Query: 483 ELERVLDQQCTRAATLPLLAEDQRR 557
L+ +L ++C L D+R+
Sbjct: 1588 TLQELLRERCEEVDVLKEKISDKRQ 1612
>SB_40461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 366 WTGARCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVAQSFRSHARSSR 223
W CR GSS S +P E L + T ++P QS R A+ SR
Sbjct: 276 WWADSCRGGSSASADEP----EPAGLVAVTLDASPAYQSLRHLAKLSR 319
>SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 333 LSPSQPFRQLESIDLSSKTWVSNPVAQSFRSHARSSRWPGVA 208
L P PF++LES+ + K VS V++ A S PG A
Sbjct: 451 LEPMLPFKRLESLPIPDKVTVSMTVSEPAVLTALSDLHPGKA 492
>SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 306 AVGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREE 485
+V ++ ET + G +T ER +RP +D RE+ R A K RE+
Sbjct: 29 SVSSVRSERETPRDRNGRTATRRRPERRDERPRKLDDKPRELLDRDSGRAGSGEK--RED 86
Query: 486 LERVLDQQCTRAATLP 533
R L++ R P
Sbjct: 87 KHRRLEKPAQRERNDP 102
>SB_45968| Best HMM Match : DUF1279 (HMM E-Value=1.2)
Length = 180
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 312 GMAETDSETI--PNGTGPL---STEEEDERLKQRPADIDADVREMERRK 443
G+ TD ETI PN + + E +ERL +R +++ + RE+E +K
Sbjct: 23 GVVTTDRETIDDPNTSESRRQEARERNEERLSERIEELERENRELENQK 71
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 325 RTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLCPRSCSARNWNGSST 504
R+ RRSR+ P+R S SS R S+ K + S S+ PRS +R+
Sbjct: 243 RSARRSRSPQKSRSPQRSRSPRSSKRYRSSRSHRKHRSHSRSR--SPRSKRSRSPRKRRR 300
Query: 505 SNAPGRRRFR 534
S + RR+R
Sbjct: 301 SKSRSPRRYR 310
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 326 GLRDDPERHRAPVHRGGRRALEAASGRHRRRCPRNGTPEARRSS 457
G RD R +P H RR+ + R RR R+ +P RR S
Sbjct: 205 GYRDQRRRSHSPAHH--RRSRSRSRSRSPRRRRRSRSPRRRRRS 246
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 614 QERKLGPXRLSGVQFSRRPSPLILCKKRKRRRPGALLVEDPFQFLAEQLRG 462
+ R+ GP L RR P+ L +RRR G V P Q E+ RG
Sbjct: 86 RRRREGPIHLDSTMRRRREGPIHLDSTMRRRREG---VHPPGQHHEEEERG 133
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 211 SDKLDDHYT--QNSHTNLNGDRNRH*ARNIIFVKTRTYCSLYNFYS 80
SD D + Q+ NLN R N+ F T T+C L+N +S
Sbjct: 316 SDSFDPFHAVGQSEGVNLNKVREHQVKVNVWFCPTNTHCRLHNKHS 361
>SB_43438| Best HMM Match : DUF965 (HMM E-Value=0.71)
Length = 130
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 413 RRCPRNGTPEARRSSYVLEAVPRGIGTG 496
RR PR+ T + RR Y + ++PR G
Sbjct: 78 RRIPRDDTLKDRRKVYAVSSIPRSASAG 105
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 342 PNGTGPLSTEEEDERLKQRPADIDADVREMERRKR 446
PNG P+ + RL RPAD+ D E + R
Sbjct: 296 PNGRPPVPRQGPGSRLPPRPADMKPDGEREESKPR 330
>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 539
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 567 PPTISFDPLQEAEASPPWCIAGRGPVPIPRGT 472
PP PL + + PP +GR P PIP GT
Sbjct: 421 PPLEEKTPLDKRASLPPPA-SGRPPAPIPSGT 451
>SB_34319| Best HMM Match : C2 (HMM E-Value=0.003)
Length = 557
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 288 SSKTWVSNPVAQSFRSHA 235
+S+ WVS +A FRSHA
Sbjct: 124 TSRAWVSESIADDFRSHA 141
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/46 (21%), Positives = 28/46 (60%)
Frame = +3
Query: 372 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQ 509
++ + +K++ ++ + RE+ER+ VE L ++E++ +L ++
Sbjct: 80 QKQQDIKRQRETLEREQRELERKGEVEKLEEELTAQKEIQSILQEE 125
>SB_58782| Best HMM Match : Hormone_5 (HMM E-Value=2.1)
Length = 215
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 136 VLSACYDRRSNLCVNFVCSDHLICRYAG 219
V+ C+ LC+N C H+I ++G
Sbjct: 85 VIVTCFQTPHRLCINGTCMGHMIPMFSG 112
>SB_51216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +3
Query: 318 AETDSETIPNGTGPLSTEEEDERLKQRPADID------ADVREMERRKRVEALMSS 467
AE D + +ST ER++QRPA +D A VR ++ RV L ++
Sbjct: 27 AELDDVAMDTEEPSVSTTRRPERIRQRPARLDPTVWCTALVRNIDNHLRVSVLTTT 82
>SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87)
Length = 212
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 304 ELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLCPRSCSAR 483
+LS + +R RRS P PPRR++S PT S K A + + +S AR
Sbjct: 149 QLSNYQQRV-RRSSDREAPPPPRRRSSDRGMTTPTRRRSSEKGPASQKPQFVV-QSAVAR 206
Query: 484 N 486
+
Sbjct: 207 D 207
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Frame = +2
Query: 365 HRGGRRALEAASGRHRR----------RCPRNGTPEARRSS 457
H+GG RA + +HRR R PR GTP R +
Sbjct: 873 HKGGNRATQEREKKHRRNQPDKRRTQMRIPRKGTPRKRNQT 913
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 372 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLPLLAEDQ 551
EE+ R K+ + E RR+ + L REE R+ D++ R E++
Sbjct: 1114 EEERRRKEEEEQRRREEEERRRREEEDRLREEARRREEERRLEDERWERE------REEE 1167
Query: 552 RRW 560
RRW
Sbjct: 1168 RRW 1170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,286,095
Number of Sequences: 59808
Number of extensions: 464392
Number of successful extensions: 2169
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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