Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1388
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 54 1e-07
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 54 1e-07
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 54 1e-07
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 54 1e-07
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 54 1e-07
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 54 1e-07
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 54 1e-07
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 2.7
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 4.8
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 4.8
AF068710-1|AAC17772.1| 419|Caenorhabditis elegans Hypothetical ... 28 4.8
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 4.8
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.3
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 28 6.3
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 28 6.3
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 28 6.3
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 28 6.3
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 28 6.3
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 28 6.3
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 28 6.3
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 28 6.3
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 6.3
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 8.3
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 27 8.3
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 27 8.3
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 8.3
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 393 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLP 533
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ Q+C A T P
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDP 73
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 432 PFRGHRRRCRPDAASSARLPPRWTGARCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVAQ 253
P R HRR+ P +R P + + + ++ PS ++ ++ L S +W + PVAQ
Sbjct: 49 PIRHHRRQLEP-----SRSAPLASTEQPVAQATTHPSTENARVPALVLRSGSWRALPVAQ 103
Query: 252 SFRSHARSSRWP 217
SH R WP
Sbjct: 104 GGSSHIRI--WP 113
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 337 RSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLCPRSCSARNWNGSSTSNAP 516
+SR+ P P RR+ S +S P P AK S SK P + R+ + S + AP
Sbjct: 335 KSRSKSPPAPARRRRSPSASKSPPPAPKRAK----SRSK--SPPARRRRSPSASKSPPAP 388
Query: 517 GRRR 528
RRR
Sbjct: 389 RRRR 392
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 372 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 491
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 372 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 491
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 372 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 491
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 315 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 494
M E D + + N + S EEE+ + + D D +E ERR++ EA R L
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306
Query: 495 VL 500
+L
Sbjct: 307 LL 308
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 298 RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 453
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 298 RLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 453
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AF068710-1|AAC17772.1| 419|Caenorhabditis elegans Hypothetical
protein T06A1.1 protein.
Length = 419
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 439 GSASKLLCPRSCSARNWNGSSTSNAPGRRRF 531
G S + PR C + WN +T + P + F
Sbjct: 41 GQGSSRIVPRQCHVQYWNQKTTHSLPHQEEF 71
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -2
Query: 567 PPTISFDPLQEAEASPPWCIAGRGPVPIPRGTASRT*ELRRASGVPFRGHRRRCRPDAAS 388
PP +P++ ASPP P R RT RR+ P RRR
Sbjct: 76 PPKRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRT---RRSPSPP---RRRRISRSPVR 129
Query: 387 SARLPPRWTGARCRS 343
+R PPR +R RS
Sbjct: 130 RSRSPPRRQVSRSRS 144
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 343 RTAPGPCPPRRKTSA*SSVRPT-STPMSAKWNAGSASKLLCPRSCS---ARNWNGSSTSN 510
RT P PPRR+ + S VR + S P + S RS S A+ S S
Sbjct: 110 RTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSK 169
Query: 511 APGRRRFRFLQR 546
+P RR +R QR
Sbjct: 170 SPPRRNYRQRQR 181
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -2
Query: 546 PLQEAEASPPWCIAGRGPVPIPRGTASRT*ELRRASGVPFRGHRRRCRPDAASS 385
P ++ P GPV PR A RRA G P R RR R DA S
Sbjct: 80 PNPPTQSPAPRAAPDHGPVQAPRNLAQALNLPRRARGRPRRSDVRRTR-DAQDS 132
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/105 (21%), Positives = 52/105 (49%)
Frame = +3
Query: 276 RSCLTNQ*TRAVGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEA 455
+ LT + RA G ++ D L ++ED+ ++ +++ +E E +R+EA
Sbjct: 58 KKTLTKRKRRATGSSDDDQVD-----DDLFADKEDKARWKKLTELE---KEQEIFERMEA 109
Query: 456 LMSSKLFREELERVLDQQCTRAATLPLLAEDQRRWSAGELHTGKP 590
+ + REE+ + L ++ +++ + E +R+ ++G G P
Sbjct: 110 -RENAIAREEIAQQLAKKAKKSSEKGVKTEKRRKMNSGGSDAGSP 153
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/105 (21%), Positives = 52/105 (49%)
Frame = +3
Query: 276 RSCLTNQ*TRAVGMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEA 455
+ LT + RA G ++ D L ++ED+ ++ +++ +E E +R+EA
Sbjct: 58 KKTLTKRKRRATGSSDDDQVD-----DDLFADKEDKARWKKLTELE---KEQEIFERMEA 109
Query: 456 LMSSKLFREELERVLDQQCTRAATLPLLAEDQRRWSAGELHTGKP 590
+ + REE+ + L ++ +++ + E +R+ ++G G P
Sbjct: 110 -RENAIAREEIAQQLAKKAKKSSEKGVKTEKRRKMNSGGSDAGSP 153
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 172 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 231
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 271
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 172 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 231
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 271
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 150 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 209
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 210 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 249
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 150 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 209
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 210 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 249
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 360 LSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQCTRAATLPLL 539
L EE +++Q+ +++ +R+ E ++ + + + ELERV ++ R + +L
Sbjct: 430 LQEEERQRKIQQQKVEME-QIRQQEEARQEQLRVLEEERARELERVRQEELERQHQMEIL 488
Query: 540 ---AEDQRR 557
EDQ++
Sbjct: 489 RQQEEDQKK 497
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 24 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 83
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 84 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 123
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 172 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 231
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 271
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 172 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 231
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 271
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 289 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVR-PTSTPMSAKWNAGSASK--LL 459
Q +R+ + R + + + +P P P+ KT S +R PT+ K S +
Sbjct: 172 QADRIMQNNENERVEEKKQMSPTPSQPQHKTPQRSGIRPPTAILRQPKPIPASLPRPATA 231
Query: 460 CPRSCSARNWNGSSTSNAPGRRRFRFLQRIKGDGRRENCT 579
P S A + + S AP R + R + D ++ T
Sbjct: 232 TPSSQRAISTPRQTASTAPSPRPISKMSRERSDVQKSTST 271
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 386 LEAASGRHRRRCPRNGTPEARRSSYVLEAVPRGIGTGPRPA 508
+ S HR+ R T EAR LEA+ RGI G PA
Sbjct: 2646 MHTRSSLHRQNAIRRTTTEARE----LEAISRGIRMGELPA 2682
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 327 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 452
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 364 PPRRKTSA*SSVRPTSTPMSAKWNAGSASKLL-CPRSCSARNWNGSSTSNAPGRR 525
PP R+ V+PTS P + W +LL NW + S GR+
Sbjct: 45 PPHRRGHNYELVKPTSNPEAMSWTHEDEFELLKAAHKFKMGNWGEIAESIGRGRK 99
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 364 PPRRKTSA*SSVRPTSTPMSAKWNAGSASKLL-CPRSCSARNWNGSSTSNAPGRR 525
PP R+ V+PTS P + W +LL NW + S GR+
Sbjct: 58 PPHRRGHNYELVKPTSNPEAMSWTHEDEFELLKAAHKFKMGNWGEIAESIGRGRK 112
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 327 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 452
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,592
Number of Sequences: 27780
Number of extensions: 332914
Number of successful extensions: 1354
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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