Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1387
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7ETN5 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   4.5  
UniRef50_A5FAC8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A7ETN5 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 452

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 289 MSRETLQKLSGLMMRTMKFFFPPMQYFIRLRRRRVDDYMHIID--SWTDAEFKNR 447
           M + T + L G   +   F   P Q++++L +RRVDD+  II   + +D  FK+R
Sbjct: 148 MGKHTRKFLGGA--KDFVFINYPQQHYVQLEKRRVDDWFEIIPYRARSDTPFKDR 200


>UniRef50_A5FAC8 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 514

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +1

Query: 190 KMIKNNQIIWLAETNNFLISTETVIQTVSVMYLMSRETLQKLSGLMMRTMKFFFPPMQYF 369
           +M+  ++II     N+  + T+ +   +S     ++E+L++L  L+ +   F F      
Sbjct: 405 RMLIEHRIILEEYENSKKVFTKILSHNISSF---NKESLKRLRPLLDKLKHFNFQKYSVI 461

Query: 370 IR-LRRRRVDDYMHIIDSWTDAEFKNRMRLSKKNS 471
            R + +   D+ M   + W D+ F+ +MRL  K S
Sbjct: 462 ERSINKEYTDEEMRKYEYWLDSPFRTKMRLITKIS 496


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,965,894
Number of Sequences: 1657284
Number of extensions: 8634102
Number of successful extensions: 17848
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17847
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)