Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1387
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ231605-1|ABA71711.1|  356|Drosophila melanogaster male accesso...    30   2.4  
AE014296-3110|ABI31261.1|  356|Drosophila melanogaster CG32203-P...    30   2.4  
AE014296-2023|AAF50017.2|  389|Drosophila melanogaster CG7303-PA...    29   4.2  

>DQ231605-1|ABA71711.1|  356|Drosophila melanogaster male accessory
           gland protein protein.
          Length = 356

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = -3

Query: 287 RYMTETVCITVSVLIKKLLVSASQIIWLFLIIFQHSQLVNNKFLLKILGISNL 129
           RY T+ +  ++  ++K + +  S+   LFL  F+ S+ V+    LK LGI NL
Sbjct: 243 RYSTQQILYSLDTILK-IKLRRSKKTHLFLPKFKVSESVDLNMALKALGIQNL 294


>AE014296-3110|ABI31261.1|  356|Drosophila melanogaster CG32203-PB
           protein.
          Length = 356

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = -3

Query: 287 RYMTETVCITVSVLIKKLLVSASQIIWLFLIIFQHSQLVNNKFLLKILGISNL 129
           RY T+ +  ++  ++K + +  S+   LFL  F+ S+ V+    LK LGI NL
Sbjct: 243 RYSTQQILYSLDTILK-IKLRRSKKTHLFLPKFKVSESVDLNMALKALGIQNL 294


>AE014296-2023|AAF50017.2|  389|Drosophila melanogaster CG7303-PA
           protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 26/95 (27%), Positives = 39/95 (41%)
 Frame = +3

Query: 9   YNCIKITILIFSNKYGGTAVYTYLR**RQCINKLEQIILL*ITYTENFKEKFIVYKLRML 188
           Y+C  +TIL+ S   G  AV  Y    R  I    QIILL I + +      +   LR L
Sbjct: 129 YSCRNLTILVTSAAGGVLAVAFYYIHYRSGIGAKRQIILLLIYFLQLLYSTLLALYLRTL 188

Query: 189 KND*KQPNNLACRNQQLFN*HRDSDTDSFSHVSNV 293
             +  Q      +    FN       +++  +SN+
Sbjct: 189 MMNLAQRIGFLNQKLDTFNLQDCGHMENWRELSNL 223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,229,600
Number of Sequences: 53049
Number of extensions: 384307
Number of successful extensions: 631
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)