Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1386
         (212 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2ERX9 Cluster: Surface antigen BspA-like; n=1; Trichom...    33   1.7  
UniRef50_Q10VX3 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q653N9 Cluster: Putative uncharacterized protein P0431E...    31   5.1  
UniRef50_A5D623 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_A2ERX9 Cluster: Surface antigen BspA-like; n=1;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 746

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -1

Query: 173 GFVSFRRVIMVAYYLFSIGNGAQVSENKTKLLDVVTCVPPKYPLKSQ*IKSTI 15
           G  S R+ I      FS+GN A   +NKT    V+ C PP  P K   I STI
Sbjct: 575 GCTSIRQFICNESDYFSVGNRALFDKNKT----VLVCYPPASPSKFFYIPSTI 623


>UniRef50_Q10VX3 Cluster: Putative uncharacterized protein; n=1;
           Trichodesmium erythraeum IMS101|Rep: Putative
           uncharacterized protein - Trichodesmium erythraeum
           (strain IMS101)
          Length = 271

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 39  LQWIFWRNTSNHVQQLRFIFRHLCTITNAKQIISHHYYTPKADETLI*ENKTN--YLTSF 212
           LQ   +RN S  +   +FI+RHL T    ++ I  H  T    +T I  N +   YL  F
Sbjct: 33  LQKFIYRNLSTDIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIYRNLSTDIYLQKF 92


>UniRef50_Q653N9 Cluster: Putative uncharacterized protein
           P0431E05.13; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0431E05.13 - Oryza sativa subsp. japonica (Rice)
          Length = 152

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 124 ALVMVHRCRKIKRSCWTW 71
           A+V+V RCR+ +RS WTW
Sbjct: 11  AVVVVARCRRRRRSSWTW 28


>UniRef50_A5D623 Cluster: Putative uncharacterized protein; n=1;
           Pelotomaculum thermopropionicum SI|Rep: Putative
           uncharacterized protein - Pelotomaculum
           thermopropionicum SI
          Length = 254

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 124 ALVMVHRCRKIKRSCWTWLLVFLQN 50
           A+ M  +CR  K  CW W+ +FL++
Sbjct: 210 AIFMPRKCRWKKAVCWIWIWIFLKS 234


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,514,975
Number of Sequences: 1657284
Number of extensions: 3288483
Number of successful extensions: 8366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8359
length of database: 575,637,011
effective HSP length: 49
effective length of database: 494,430,095
effective search space used: 10383031995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)