Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1386
         (212 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113370-1|AAI13371.1|  673|Homo sapiens chromosome 20 open read...    29   3.6  
BC105093-1|AAI05094.1|  673|Homo sapiens chromosome 20 open read...    29   3.6  
BC090879-1|AAH90879.2|  519|Homo sapiens C20orf19 protein protein.     29   3.6  
BC065550-1|AAH65550.1|  577|Homo sapiens C20orf19 protein protein.     29   3.6  
BC045826-1|AAH45826.1|  570|Homo sapiens C20orf19 protein protein.     29   3.6  
BC039296-1|AAH39296.1|  281|Homo sapiens C20orf19 protein protein.     29   3.6  

>BC113370-1|AAI13371.1|  673|Homo sapiens chromosome 20 open reading
           frame 19 protein.
          Length = 673

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 172 DFSTEHKSPQPTKNFSIPDPHSHRQ 196


>BC105093-1|AAI05094.1|  673|Homo sapiens chromosome 20 open reading
           frame 19 protein.
          Length = 673

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 172 DFSTEHKSPQPTKNFSIPDPHSHRQ 196


>BC090879-1|AAH90879.2|  519|Homo sapiens C20orf19 protein protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 18  DFSTEHKSPQPTKNFSIPDPHSHRQ 42


>BC065550-1|AAH65550.1|  577|Homo sapiens C20orf19 protein protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 76  DFSTEHKSPQPTKNFSIPDPHSHRQ 100


>BC045826-1|AAH45826.1|  570|Homo sapiens C20orf19 protein protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 69  DFSTEHKSPQPTKNFSIPDPHSHRQ 93


>BC039296-1|AAH39296.1|  281|Homo sapiens C20orf19 protein protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 47  DILEEHK*PRPTASFYFPTPVHHYQ 121
           D   EHK P+PT +F  P P  H Q
Sbjct: 172 DFSTEHKSPQPTKNFSIPDPHSHRQ 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,875,169
Number of Sequences: 237096
Number of extensions: 508101
Number of successful extensions: 1209
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)