Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1385
(495 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 94 5e-20
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 94 5e-20
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 93 7e-20
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 93 7e-20
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 93 7e-20
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 93 7e-20
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 93 7e-20
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 93 7e-20
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 93 7e-20
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 89 2e-18
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 79 1e-15
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 78 3e-15
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 54 7e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 46 1e-05
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 45 2e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 5e-04
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 35 0.026
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 35 0.035
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 27 5.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 6.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 6.9
At5g28690.1 68418.m03520 expressed protein 27 9.2
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 93.9 bits (223), Expect = 5e-20
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV+NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFN PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 93.9 bits (223), Expect = 5e-20
Identities = 41/52 (78%), Positives = 43/52 (82%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV+NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 76.6 bits (180), Expect = 9e-15
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHP+LLTEAPLNPKAN EKMTQIMFETFN PAMY
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFNTPAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3
Query: 234 DRTDSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
++ D+YV DEAQSK ILTLKYP EH +V+NWDDMEKIWHHTFYNELR+ P P
Sbjct: 50 NQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 77.4 bits (182), Expect = 5e-15
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
+++ +V DNG+GM K S+VGRPR GV VGM Q
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQ 51
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 93.5 bits (222), Expect = 7e-20
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3
Query: 234 DRTDSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
++ D+YV DEAQSK ILTLKYP EH +V+NWDDMEKIWHHTFYNELR+ P P
Sbjct: 50 NQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 77.4 bits (182), Expect = 5e-15
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
+++ +V DNG+GM K S+VGRPR GV VGM Q
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQ 51
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D+YV DEAQSK ILTLKYP EH IV NWDDMEKIWHHTFYNELRV P P
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 76.6 bits (180), Expect = 9e-15
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHP+LLTEAPLNPKAN EKMTQIMFETFN PAMY
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMY 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
E++ LV DNG+GM K SIVGRPR GV VGMGQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ 51
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 93.5 bits (222), Expect = 7e-20
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3
Query: 234 DRTDSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
++ D+YV DEAQSK ILTLKYP EH +V+NWDDMEKIWHHTFYNELR+ P P
Sbjct: 50 NQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 77.4 bits (182), Expect = 5e-15
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKAN EKMTQIMFETFN+PAMY
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 135
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
+++ +V DNG+GM K S+VGRPR GV VGM Q
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQ 51
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 88.6 bits (210), Expect = 2e-18
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +3
Query: 234 DRTDSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
D D++V DEAQ++ IL+LKYP EH +V+NWDDMEKIWHHTFYNELR+ P P
Sbjct: 51 DEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHP 105
Score = 68.1 bits (159), Expect = 3e-12
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHP+LLTEAPLNPK N EKMTQIMFE+F P+MY
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMY 136
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +2
Query: 98 EEVAALVVDNGSGMCKXXXXXXXXXXXXXXSIVGRPRXXGVXVGMGQ 238
+E A+V DNG+GM K S+VGRPR GV VGM +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDE 52
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 79.4 bits (187), Expect = 1e-15
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 234 DRTDSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
+ D +V D+A+++ ILTL YP EH +V+NWDDMEKIW+HTFY+ELRV P P
Sbjct: 5 NENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 70.5 bits (165), Expect = 6e-13
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAPLNPKA+ EKMTQIMFETF P+MY
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMY 90
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 78.2 bits (184), Expect = 3e-15
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
+SYV +E + ILTLK P EH IV NWDDMEKIWH+TFYNELRV P P
Sbjct: 42 ESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 71.3 bits (167), Expect = 3e-13
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PEEHPVLLTEAP NPKAN EKMTQIMFE+F+ PAMY
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMY 124
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 53.6 bits (123), Expect = 7e-08
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 285 LTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXP 386
L + YP + IV NWDDME +W H FYNEL++ P
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
P + +LLT+ PLNP N EKM + MFE +N ++
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVF 134
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
PE+H LLTE+PL P + E +I+FETFN P +Y
Sbjct: 117 PEDHYFLLTESPLTPPESREYTGEILFETFNVPGLY 152
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 243 DSYV*DEAQSKXXILT---LKYPXEHXIVTNWDDMEKIWHHTFYNELRVXP 386
D Y+ DEA +K + L YP EH V +WD ME+ W +N LR P
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDP 117
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 370 SCVSX-PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
SC+ P EHP+LL E PLN + EK ++MFE + PA++
Sbjct: 116 SCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALF 157
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 YV*DEAQS-KXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
YV +A S + + + P + IV++WD ++ IW H F + L + P P
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 40.7 bits (91), Expect = 5e-04
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 391 EHPVLLTEAPLNPKANXEKMTQIMFETFNTPAM 489
+HP+L+TE NP + KM +++FET+ PA+
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAV 148
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 35.1 bits (77), Expect = 0.026
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 300 PXEHXIVTNWDDMEKIWHHTFYNELRVXPRGTP 398
P + IVT+WD ++ +W H F N L + P P
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Score = 29.9 bits (64), Expect = 0.98
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEK 447
P EHP+LL E PLN + EK
Sbjct: 116 PTEHPMLLAEPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 391 EHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
E +L T+ PKA E++ Q+MFETFN Y
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFY 121
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 385 PEEHPVLLTEAPLNPKANXEKMTQIMFETFNTPAMY 492
P +LLTEAPL+ + +++FE F ++Y
Sbjct: 92 PSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLY 127
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 258 DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXP 386
D A L++KY H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 258 DEAQSKXXILTLKYPXEHXIVTNWDDMEKIWHHTFYNELRVXP 386
D A L++KY H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g28690.1 68418.m03520 expressed protein
Length = 192
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 331 MTWRRFGI-IPSTMSCVSXPEEHPVLLTEAPLNPKANXEK 447
M RR G+ +P + S S PE P + T AP PK K
Sbjct: 1 MVRRREGLTLPISSSTPSLPESLPDIKTVAPHKPKQRLSK 40
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,345,230
Number of Sequences: 28952
Number of extensions: 161987
Number of successful extensions: 348
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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