Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1384
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC...    29   6.5  
AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB...    29   6.5  
AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA...    29   6.5  

>AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC,
           isoform C protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 307 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 483
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 611 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 666

Query: 484 PTCSIEQ 504
               +EQ
Sbjct: 667 ALSVVEQ 673


>AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB,
           isoform B protein.
          Length = 1579

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 307 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 483
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 611 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 666

Query: 484 PTCSIEQ 504
               +EQ
Sbjct: 667 ALSVVEQ 673


>AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA,
           isoform A protein.
          Length = 1572

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 307 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 483
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 604 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 659

Query: 484 PTCSIEQ 504
               +EQ
Sbjct: 660 ALSVVEQ 666


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,039,180
Number of Sequences: 53049
Number of extensions: 699045
Number of successful extensions: 1518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)