Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1384
(729 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 25 0.55
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 25 0.55
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 24 1.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 3.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.8
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 6.8
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 22 6.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 9.0
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 25.4 bits (53), Expect = 0.55
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 229 HFTIAVGRVYKSILCLSFVTNTCLYLW 149
HF I + +Y +L +S V N C+ +W
Sbjct: 55 HFHIGLAIIYSMLLIMSLVGNCCV-IW 80
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 25.4 bits (53), Expect = 0.55
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 229 HFTIAVGRVYKSILCLSFVTNTCLYLW 149
HF I + +Y +L +S V N C+ +W
Sbjct: 55 HFHIGLAIIYSMLLIMSLVGNCCV-IW 80
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 585 LPAWCRKTVTEVTAKMQCELSSSKD 659
+PAWC + + T KM + SS D
Sbjct: 337 VPAWCDRVLLNPTDKMLVQDISSPD 361
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 506 QGCTSILRCISSS 544
+GCT++LRC+ S
Sbjct: 144 RGCTAVLRCVVPS 156
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 506 QGCTSILRCISSS 544
+GCT++LRC+ S
Sbjct: 144 RGCTAVLRCVVPS 156
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 22.6 bits (46), Expect = 3.9
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +2
Query: 104 KRCIISRIETLANNRPKI*ACISNEGQTKDRFIHTAHGDSKMDSRDLCAMRC-LITTDTI 280
K+ I + N K+ C K+ G+ D R +C M+C +I T +
Sbjct: 25 KKMTIEEAKKTIKNLRKV--CSKKNDTPKELLDGQFRGEFPQDERLMCYMKCIMIATKAM 82
Query: 281 K 283
K
Sbjct: 83 K 83
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 691 FPTNFLFLKLQSLDEDNS 638
FP NF F+K S D ++S
Sbjct: 304 FPFNFAFIKNVSRDSNSS 321
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -2
Query: 533 CSVILTYSPACSIEHVGIP 477
C TY+P C +H P
Sbjct: 149 CVPFTTYTPVCEYDHTWWP 167
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.8 bits (44), Expect = 6.8
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 116 ISRIETLANNRPKI*ACISNEGQTKDRFIHTAHGDSKMDSRDLCAMRC-LITTDTIK 283
I ++ N K+ C K+ G+ D R +C M+C +I T +K
Sbjct: 3 IEELKKTIKNLRKV--CSKKNDTPKELLDGQFRGEFPQDERLMCYMKCIMIATKAMK 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 691 FPTNFLFLKLQSLDEDNS 638
FP NF F+K S D ++S
Sbjct: 304 FPFNFAFIKNVSRDSNSS 321
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 645 SSSKDWSLRNKKFVGKERRNSYHGQR 722
S D+ R + + K S+HGQR
Sbjct: 362 SKRSDYDSRPQYQIDKRSMGSHHGQR 387
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,260
Number of Sequences: 438
Number of extensions: 4624
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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