Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1383
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q606U2 Cluster: Glycerophosphoryl diester phosphodieste...    36   0.96 
UniRef50_Q11WU4 Cluster: CHU large protein; uncharacterized; n=1...    33   6.7  
UniRef50_Q4Z705 Cluster: Putative uncharacterized protein; n=2; ...    33   6.7  
UniRef50_P42701 Cluster: Interleukin-12 receptor beta-1 chain pr...    33   6.7  
UniRef50_A5PMA2 Cluster: Novel protein; n=4; Clupeocephala|Rep: ...    33   8.9  
UniRef50_Q832C0 Cluster: Peptidase, M23/M37 family; n=1; Enteroc...    33   8.9  

>UniRef50_Q606U2 Cluster: Glycerophosphoryl diester
           phosphodiesterase family protein; n=7; cellular
           organisms|Rep: Glycerophosphoryl diester
           phosphodiesterase family protein - Methylococcus
           capsulatus
          Length = 415

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = +1

Query: 82  PTKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSAPRPPALRS 261
           P    C  TTD+ T  E K++   RG+ +AF+    +P+    GTPDWR++    P   +
Sbjct: 152 PASAEC-RTTDI-TLAEFKML---RGKMDAFNPRAKTPVEFQGGTPDWRTNLYAGPTSGT 206

Query: 262 AK*THKRQL 288
              THK  +
Sbjct: 207 LM-THKESI 214


>UniRef50_Q11WU4 Cluster: CHU large protein; uncharacterized; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: CHU large
           protein; uncharacterized - Cytophaga hutchinsonii
           (strain ATCC 33406 / NCIMB 9469)
          Length = 1184

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  SGGNRRTSALHWGWKAGHVGVEPTKTSCLSTT 111
           SG N RT  +  G  +G++ V PT T+C  TT
Sbjct: 305 SGANTRTITVTAGATSGNISVRPTNTTCAGTT 336


>UniRef50_Q4Z705 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 301

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 542 FLIFIFKYLCAYFCNTKF--NEPESSP*NFIDLVYF 643
           FL +IF  LC YFC+T F  NE  S   + + L+YF
Sbjct: 95  FLEYIFSLLCFYFCHTCFLKNESYSFACSIVMLLYF 130


>UniRef50_P42701 Cluster: Interleukin-12 receptor beta-1 chain
           precursor; n=14; Eutheria|Rep: Interleukin-12 receptor
           beta-1 chain precursor - Homo sapiens (Human)
          Length = 662

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 55  WKAGHVGVEPTKT-SCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTP 219
           WK G  G +   T SCL   ++  + E +L +RQ G   +  ++  SP+ +P   P
Sbjct: 181 WKLGDCGPQDDDTESCLCPLEMNVAQEFQLRRRQLGSQGSSWSKWSSPVCVPPENP 236


>UniRef50_A5PMA2 Cluster: Novel protein; n=4; Clupeocephala|Rep:
           Novel protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 261

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 34  TSALHWGWKAGHVGVEPTKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHI 189
           TS +HWG K GH G+    T+ +  TD   +  +  ++R+ G        H+
Sbjct: 117 TSQMHWGDKKGHEGLIDIPTTKMKKTDQAGTSASTHIQRKSGLFSTAEVSHV 168


>UniRef50_Q832C0 Cluster: Peptidase, M23/M37 family; n=1;
           Enterococcus faecalis|Rep: Peptidase, M23/M37 family -
           Enterococcus faecalis (Streptococcus faecalis)
          Length = 925

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 11  FCQEEIAGLPPFTGDGRRGMSESNRLKPPVSQQPTSKPRMRQNS*RGKGGKVK 169
           +  +  A  PP      RG  +   L  P++++PT  P  +Q   RGK GK K
Sbjct: 90  YLADSTAEPPPDAPASMRGAVDMPLLDAPIAEEPTPAPVRKQPQKRGKKGKKK 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,344,411
Number of Sequences: 1657284
Number of extensions: 13385063
Number of successful extensions: 37036
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37023
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)