Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1383
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   3.0  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        23   9.2  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    23   9.2  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 38  PPFTGDGRRGMSESNRLKPPVSQQPTSKPR 127
           PP  GD    M  S   K P++  PT + R
Sbjct: 192 PPTPGDDSDSMGASRHGKTPLATPPTKEKR 221


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 278 NDNYGKNFY-NIFLIEFIDQYNVTRHLSNKHWY 373
           N +Y  N   N F+ +FI+  N  + ++N H++
Sbjct: 113 NKDYDLNIATNFFVDDFIEVINKYQQIANTHYH 145


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 278 NDNYGKNFY-NIFLIEFIDQYNVTRHLSNKHWY 373
           N +Y  N   N F+ +FI+  N  + ++N H++
Sbjct: 14  NKDYDLNIATNFFVDDFIEVINKYQQIANTHYH 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,643
Number of Sequences: 2352
Number of extensions: 13292
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)