Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1383
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro...    32   0.86 
AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p pro...    32   0.86 
AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB...    32   0.86 
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA...    32   0.86 
AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-P...    30   3.5  
AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p pro...    29   6.1  
AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    29   6.1  

>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
           protein.
          Length = 1199

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 85  TKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSA 237
           +KTS LS  D   S E+ + KR +G S   S     P T+P G P  R+ A
Sbjct: 217 SKTSSLS--DSMESLESNVSKRSQGSSAGSSKRGSMPKTIPPGPPSKRAKA 265


>AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p
           protein.
          Length = 1125

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 85  TKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSA 237
           +KTS LS  D   S E+ + KR +G S   S     P T+P G P  R+ A
Sbjct: 217 SKTSSLS--DSMESLESNVSKRSQGSSAGSSKRGSMPKTIPPGPPSKRAKA 265


>AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB,
           isoform B protein.
          Length = 1125

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 85  TKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSA 237
           +KTS LS  D   S E+ + KR +G S   S     P T+P G P  R+ A
Sbjct: 217 SKTSSLS--DSMESLESNVSKRSQGSSAGSSKRGSMPKTIPPGPPSKRAKA 265


>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
           isoform A protein.
          Length = 1199

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 85  TKTSCLSTTDVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSA 237
           +KTS LS  D   S E+ + KR +G S   S     P T+P G P  R+ A
Sbjct: 217 SKTSSLS--DSMESLESNVSKRSQGSSAGSSKRGSMPKTIPPGPPSKRAKA 265


>AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-PA
           protein.
          Length = 2111

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
 Frame = +1

Query: 49  WGWKAGHVGVEPTKTSC-LSTTDVQTSH-------ETKLMKRQRGESEAFSAEHISPITL 204
           WGW     G + T   C +ST D  + H       +    K  R   E F  EH  P  L
Sbjct: 47  WGWVTWRYGSDATLLVCSMSTGDYLSWHCFWSESDDLGPRKSIRCVEELFPGEHERPAML 106

Query: 205 PLGTPDWRSSAPRP 246
            +    W S   RP
Sbjct: 107 AICLESWNSGDQRP 120


>AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p protein.
          Length = 1711

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 10   FLSGGNRRTSALHWGWKAGHVGVEPTKTSCLSTTDVQTSHETKLMKRQRGESEAFSA 180
            F  GG    SAL +G  +  V     K + LS  +  T   TK  +++  ES+ F A
Sbjct: 996  FSFGGGAAKSALSFGTGSPAVAAPTPKPNPLSAVEKPTPEPTKPKEQKAAESKEFKA 1052


>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 10   FLSGGNRRTSALHWGWKAGHVGVEPTKTSCLSTTDVQTSHETKLMKRQRGESEAFSA 180
            F  GG    SAL +G  +  V     K + LS  +  T   TK  +++  ES+ F A
Sbjct: 996  FSFGGGAAKSALSFGTGSPAVAAPTPKPNPLSAVEKPTPEPTKPKEQKAAESKEFKA 1052


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,069,578
Number of Sequences: 53049
Number of extensions: 628569
Number of successful extensions: 1624
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)