BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1382
(763 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 pr... 25 1.9
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 24 4.5
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 7.8
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 7.8
>AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450
protein.
Length = 505
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 521 QLSLIRRVLVRRFHTLEPQPLGTCVVDTAISGNLF 625
+L +++R+LV+ F + + L D +SG+LF
Sbjct: 88 ELDMVKRILVKDFSSFHDRGLYVNERDDPLSGHLF 122
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 115 TMSRLSCSFIV*YSETCKYDCSWSADCRKG 204
T ++++CS I +E C+ C CR+G
Sbjct: 221 TCNQITCSGIS--TEVCRRSCYCGCQCRRG 248
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 7.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 616 ATDGSVYDTSPQWLRLQSVK 557
A DG +Y PQW R+ K
Sbjct: 300 AADGMLYFIKPQWDRILEAK 319
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 7.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 616 ATDGSVYDTSPQWLRLQSVK 557
A DG +Y PQW R+ K
Sbjct: 300 AADGMLYFIKPQWDRILEAK 319
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,855
Number of Sequences: 2352
Number of extensions: 14958
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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