Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1380
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    27   0.89 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    26   1.6  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.7  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 295 VQLISLMAYDNWNVCSTTSLCHIVNRIMKL 384
           VQ +S +    W VCST  L  ++N+++ +
Sbjct: 399 VQSLSALCLACWGVCSTFVLLWLINKVVPI 428


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 YYCYVWQTINIKINFRILICL 258
           YYCY++   N  INF IL C+
Sbjct: 360 YYCYLFFITNFGINF-ILYCI 379


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 716 HPSNRTHYYFKPEIGXDGDMMPKPA 790
           +PSN  H    P+   DG+  P+PA
Sbjct: 28  YPSNYQHQPPHPQFIGDGESSPQPA 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,329
Number of Sequences: 2352
Number of extensions: 15258
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)