Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1378
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   4.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   9.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   9.4  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 88  QNTEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGL 237
           Q+ ++    + L  R  ++ ++YN +  K F    K    +AK+EKE  L
Sbjct: 74  QSLQFRLLENKLGVRQENR-VKYNQNYSKVFGNDEKALEQIAKSEKEPSL 122


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 88  QNTEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGL 237
           Q+ ++    + L  R  ++ ++YN +  K F    K    +AK+EKE  L
Sbjct: 134 QSLQFRLLENKLGVRQENR-VKYNQNYSKVFGNDEKALEQIAKSEKEPSL 182


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 88  QNTEYCNYRSPLSTRYASKEMQYNFSDQKKFSTWRKLWIYLAKAEKELGL 237
           Q+ ++    + L  R  ++ ++YN +  K F    K    +AK+EKE  L
Sbjct: 134 QSLQFRLLENKLGVRQENR-VKYNQNYSKVFGNDEKALEQIAKSEKEPSL 182


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 160 NCTAFLWRHI 131
           N TAFLW HI
Sbjct: 165 NKTAFLWYHI 174


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 413 VARRGSQVYDG 381
           V +RGSQ YDG
Sbjct: 204 VWQRGSQYYDG 214


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 413 VARRGSQVYDG 381
           V +RGSQ YDG
Sbjct: 204 VWQRGSQYYDG 214


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 85  LQNTEYCNYRSPLSTRY 135
           L   +YC+Y + L  RY
Sbjct: 193 LMELQYCHYLNILRVRY 209


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 85  LQNTEYCNYRSPLSTRY 135
           L   +YC+Y + L  RY
Sbjct: 193 LMELQYCHYLNILRVRY 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,368
Number of Sequences: 336
Number of extensions: 2430
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)