Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1378
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF426163-1|ABO26406.1|  155|Anopheles gambiae unknown protein.         27   0.41 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   2.2  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   2.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   3.8  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   6.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    22   8.8  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    22   8.8  

>EF426163-1|ABO26406.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 26.6 bits (56), Expect = 0.41
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = -2

Query: 391 CMMGAARGHLSPSVWTCAITS*RTRFSCSAAAGKSMSCTAASSSAI--ERRLCPIRAPFQ 218
           CM   A    S S   C   +  + +S   A+ +S+ CT+AS  +I       P  +  Q
Sbjct: 13  CMFFGALFAQSVSALRCYQCASPSSWSDCQASAQSVECTSASQMSIMGHSLFLPAESRQQ 72

Query: 217 L*PNKSRVYAKSKI 176
           L P    VYAK  +
Sbjct: 73  LEPACVSVYAKGTV 86


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 381 ARRGDTSRRACGHAPSRRDEPASRAQPP 298
           A  G   RRA   A  RR  P +R  PP
Sbjct: 488 APEGRRRRRAIARARRRRCRPRARRNPP 515


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 352 RSARGVPSPRPSYTW 396
           RS +GV  PR ++TW
Sbjct: 90  RSPKGVDMPRTTFTW 104


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 322  TRFSCSAAAGKSMSCTAASS 263
            T  SC   AG++  CT+ SS
Sbjct: 1327 TATSCERIAGETFECTSTSS 1346


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -2

Query: 292 KSMSCTAASSSAIERRLCPIRAPFQL*PNKSRVYAKSK 179
           K +   AA+++A+ + +CP      + P K +++   K
Sbjct: 123 KGLLLAAAAAAAVNQSVCPQTTLLPVTPEKPKLFKPYK 160


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = -2

Query: 133 IVYSKVTGNYSIRY----FAIQQGRQLWSFYRIYFTNFTL 26
           ++++   GNY +RY         G  LW    IY ++ T+
Sbjct: 114 VLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTI 153


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 112 GNYSIRYFAIQQGRQLWSFYRIYFTNFTL 26
           G+YS R F +  G   +S    YF   T+
Sbjct: 183 GSYSNRSFTLVPGTAEYSLPHAYFLTITI 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,898
Number of Sequences: 2352
Number of extensions: 9224
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)