Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1375
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6GYM9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q4CYW9 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  

>UniRef50_A6GYM9 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium psychrophilum JIP02/86|Rep: Putative
           uncharacterized protein - Flavobacterium psychrophilum
           (strain JIP02/86 / ATCC 49511)
          Length = 867

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 34  NIFYFTISTYLNYAFLSHKHFIFTDMFDKY 123
           NIF FT   + NYAF+ H+H+I T ++ ++
Sbjct: 637 NIFLFTF-WFSNYAFVEHEHYISTGIYQRF 665


>UniRef50_Q4CYW9 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 553

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = -2

Query: 336 IYVLVLA*FMYRNHSLYTLQVIRIAVILIFGTYIHSMMLVLFIIM*KCIVKDQ 178
           I+V +LA  ++ +H  Y  +V+ +   L+   Y H+  LVLF++   C+V  Q
Sbjct: 90  IWVYILALLLFMSHKYYYYRVMGLHYFLLDYCYFHNACLVLFLLW--CLVDVQ 140


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,876,991
Number of Sequences: 1657284
Number of extensions: 12156534
Number of successful extensions: 20856
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20848
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)